CX295309

Overview
NameCX295309
Unique NameCX295309
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH_CHLTR (Dihydrolipoyl dehydrogenase OS=Chlamydia trachomatis GN=lpdA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27
Identity = 70/159 (44.03%), Postives = 98/159 (61.64%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGI--TIDEKRIVSSTGALALNEVP 672
            AAI AAQ GLKT  IEKR A GGTCLN GCIPSKALL  + +  +  H+    G+      ++ PAM+ +KD  V ++  G+ GL + NK+T   G G  IS +EV +  +    +V+K  +II+ATGS+ ++ PGI  + +  RI+ STG L L E+P
Sbjct:   19 AAITAAQAGLKTALIEKREA-GGTCLNRGCIPSKALLAGAEVVTQIRHA-DQFGIHVEGFSINYPAMVQRKDSVVRSIRDGLNGLIRSNKITVFSGRGSLISSTEVKI--LGENPSVIKAHSIILATGSEPRAFPGIPFSAESPRILCSTGVLNLKEIP 173          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH1_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=pdhD PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27
Identity = 75/157 (47.77%), Postives = 91/157 (57.96%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI+AAQLG K T +EK   LGG CLNVGCIPSKAL+++ H Y  A HS    G+   +V VD   +   K   V+ LT G+ GL K NKV  VKG   F+  + V V       T    KN IIATGS    LP     E R+++STGALAL E+P
Sbjct:   24 AAIRAAQLGQKVTVVEK-ATLGGVCLNVGCIPSKALINAGHRYENAKHS-DDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRVMDENSAQTYT-FKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIP 176          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH_HAEIN (Dihydrolipoyl dehydrogenase OS=Haemophilus influenzae GN=lpdA PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27
Identity = 69/157 (43.95%), Postives = 90/157 (57.32%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AA + A LGL+T  +E+   LGG CLNVGCIPSKALLH + +  EA H+   +G+ FS   ++L  + A K+  V+ LT G+ G+ K  KVT V+G   F     +     +G  T VK  N IIA GS    LP I  ++ RI  ST AL L EVP
Sbjct:   21 AAFRCADLGLETVIVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAKHA-NKNGIYFSEPRIELDEVRAGKEAVVAKLTGGLAGMAKARKVTVVEGLATFTDSHTLVARDRDGNPTTVKFDNAIIAAGSRPVQLPFIPHEDPRIWDSTDALKLKEVP 176          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH_CHLPN (Dihydrolipoyl dehydrogenase OS=Chlamydia pneumoniae GN=lpdA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.583e-26
Identity = 67/157 (42.68%), Postives = 95/157 (60.51%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI AAQ  L+T  IE+  A GGTCLN GCIPSKAL+  +++     H+    G+      +D PAM  +K+  V  + +G+EGL + NK+T +KG G  +S +EV V  I    T++K  +II+ATGS+ +  PG+     RI+SSTG L L  +P
Sbjct:   19 AAITAAQSKLRTALIEEDQA-GGTCLNRGCIPSKALIAGANVVSHIKHA-EQFGIHVDGYTIDYPAMAKRKNTVVQGIRQGLEGLIRSNKITVLKGTGSLVSSTEVKV--IGQDTTIIKANHIILATGSEPRPFPGVPF-SSRILSSTGILELEVLP 170          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH2_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=bfmBC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.502e-25
Identity = 68/165 (41.21%), Postives = 97/165 (58.79%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPS-------EVSVDTIEG-GNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI+AAQLGLKT  +EK   LGGTCL+ GCIPSKALL S+ +Y  A  +    GV+ + V ++   +  +K   V  L  G+  L KK K+    GYG+ + PS        +SV+   G  N ++  K +IIATGS  + LPG+ +D K +++S  AL + E+P
Sbjct:   19 AAIRAAQLGLKTAVVEKE-KLGGTCLHKGCIPSKALLRSAEVYRTAREA-DQFGVETAGVSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSPLPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEVDGKSVLTSDEALQMEELP 181          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH2_HALMA (Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marismortui GN=lpdA2 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 73/159 (45.91%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEG-GNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI+ AQLGL TT +E R A GGTCLN GCIPSKAL+ +S + H+A  +  S GV F+   VD+  M   KD  V+ LTRG+E L K   V  V+G  +F+    V V    EG G+  +  ++ I+ATGS   ++PG   D + I+SS  ALAL  VP
Sbjct:   24 AAIRGAQLGLDTTLVE-RDAYGGTCLNHGCIPSKALISASDVAHDARQA-ESMGV-FADPAVDMAGMTEWKDGVVTRLTRGVESLCKNAGVNLVEGTAEFVDDGTVRVAHGGEGQGSESLSFEHAIVATGSRPMAVPGFEFDGEHILSSKDALALESVP 179          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH1_PSEAE (Dihydrolipoyl dehydrogenase OS=Pseudomonas aeruginosa GN=lpdV PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 62/159 (38.99%), Postives = 98/159 (61.64%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMH--SFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI+A QLG+ T  +E   ALGGTCLNVGCIPSKAL+H++  Y +A H  S ++ G++  +  +D+   +  KD  V  LT G+  L KK+ V  V+G+ + +    V+V+   GG+  ++ +++++A GS    LP + +  K ++SST ALA   +P
Sbjct:   21 AAIRAGQLGIPTVLVEG-AALGGTCLNVGCIPSKALIHAAEEYLKARHYASRSALGIQVQAPSIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKSVAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLP 177          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH_ZYMMO (Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis GN=lpd PE=3 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23
Identity = 61/157 (38.85%), Postives = 94/157 (59.87%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI+AAQL LK   +E R  LGG CLN GCIP+K+LL S+ +YHE M +  ++G+     + DL  ++A+  +  + L  G++ L +KNKV  + G G+     ++ V+T EG   +++ K+IIIATG+  + LP +  D K I +   AL    +P
Sbjct:   19 AAIRAAQLNLKVALVE-RVHLGGICLNWGCIPTKSLLRSAEVYHE-MQNAEAYGLTSFKPDFDLDKIIARSREVATRLASGVKTLLRKNKVEVISGVGQLTGNQQMLVETTEGEEKILEAKDIIIATGARARQLPNVHSDGKHIWTYHHALKPPAMP 173          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH3_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=acoL PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.381e-22
Identity = 60/159 (37.74%), Postives = 97/159 (61.01%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AA+ AAQ G     I+K G LGGTCLN GCIP+K+LL S+++  +  H+  S G++    ++ VD   M ++K + VS L +G++ L KKN++  VKG   F+S  ++ ++  E G  + +   ++IA+GS+   LP    D + I+ S  AL+L+E+P
Sbjct:   15 AAVSAAQQGRNVLLIDK-GKLGGTCLNEGCIPTKSLLESANVLDKIKHA-DSFGIELPAGAISVDWSKMQSRKQQVVSQLVQGVQYLMKKNQIQVVKGTASFLSERKLLIEG-ENGKEIREADQVLIASGSEPIELPFAPFDGEWILDSKDALSLSEIP 170          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH_BUCAI (Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=lpdA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.285e-21
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AA + A LGL T  IE+   LGG CLNVGCIPSK LLH + +  EA     + GV F+  ++D+  +   K   V+ LT G+  + KK K+   +G+  F +   + V   E   T+    N IIATGS    +P I  D+ RI  ST AL+L ++P
Sbjct:   21 AAFRCADLGLDTVLIERYDKLGGVCLNVGCIPSKTLLHIAKVIKEAKELHKT-GVSFNKPDIDIKKIKNWKQHIVNKLTDGLSSMRKKRKIRIFQGHAIFETDKSLCVTNTEDKFTIF-FDNAIIATGSKPIKIPSIPHDDIRIWDSTDALSLKKIP 175          
The following BLAST results are available for this feature:
BLAST of CX295309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
DLDH_CHLTR1.567e-2744.03Dihydrolipoyl dehydrogenase OS=Chlamydia trachomat... [more]
DLDH1_BACSU2.047e-2747.77Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_HAEIN5.954e-2743.95Dihydrolipoyl dehydrogenase OS=Haemophilus influen... [more]
DLDH_CHLPN6.583e-2642.68Dihydrolipoyl dehydrogenase OS=Chlamydia pneumonia... [more]
DLDH2_BACSU2.502e-2541.21Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH2_HALMA3.612e-2445.91Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marism... [more]
DLDH1_PSEAE3.612e-2438.99Dihydrolipoyl dehydrogenase OS=Pseudomonas aerugin... [more]
DLDH_ZYMMO1.793e-2338.85Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis G... [more]
DLDH3_BACSU3.381e-2237.74Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_BUCAI1.285e-2139.49Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola... [more]

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Properties
Property NameValue
Genbank descriptionC05070H03SK PhIFruit1 Citrus clementina cDNA clone C05070H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295309 ID=CX295309; Name=CX295309; organism=Citrus clementina; type=EST; length=672bp
CGATTGATTGGAGAAAAAGTTGATTGAAAAATGGCGATGGCAAGTCTTGC
AAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACTCGTCGAATG
GTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTCGCTTCGGCA
TCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGGTGGTTACGT
GGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGTGCATCGAGA
AGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGCATCCCCTCT
AAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCATGCATTCTTT
TGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATTTGCCTGCTA
TGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGAGGTATTGAA
GGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATATGGCAAGTT
TATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTGGAAACACTG
TCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGACGTTAAGTCT
CTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATCCACTGGAGC
TTTAGCATTGAATGAAGTTCCT
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