CX295309

Overview
NameCX295309
Unique NameCX295309
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: STHA_MYCBT (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI +A+LG     +E+   LGG C+N G IPSK  L  + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G+FI P  + V D      T V G  IIIATG+      G+  DE+R++ S G L L  +P
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKT-LREAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLP 175          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: STHA_MYCBP (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI +A+LG     +E+   LGG C+N G IPSK  L  + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G+FI P  + V D      T V G  IIIATG+      G+  DE+R++ S G L L  +P
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKT-LREAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLP 175          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: STHA_MYCBO (Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis GN=sthA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AAI +A+LG     +E+   LGG C+N G IPSK  L  + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G+FI P  + V D      T V G  IIIATG+      G+  DE+R++ S G L L  +P
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKT-LREAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLP 175          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: MERA_ENTAG (Mercuric reductase OS=Enterobacter agglomerans GN=merA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVP 672
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++  +H+ H    S    G+  +S  +    ++AQ+   V  L     EG+   N  +T + G  +F     + V   EGG  VV     ++ATG+   V  +PG  + E    +ST ALA + +P
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRVAHIAHLRRESPFDGGMPPTSPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFKDDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPG--LKESPYWTSTEALASDTIP 270          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: MERA_SERMA (Mercuric reductase (Fragments) OS=Serratia marcescens GN=merA PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVP 672
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +    ++AQ+   V  L     EG+   N  +T   G  +F    ++SV   EGG  VV     ++ATG+     P   + E    +ST AL  + +P
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGMPPTPPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVRHGEARFKDDRDLSVSLNEGGERVVMFDRCLVATGASPAMPPIPGLKESPYWTSTEALVSDTIP 270          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: MERA_ACICA (Mercuric reductase OS=Acinetobacter calcoaceticus GN=merA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 53/161 (32.92%), Postives = 83/161 (51.55%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVP 672
            AA+KA + G   + IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T V G  +F     + V   +GG  VV     ++ATG+   V  +PG  + E    +ST AL  + +P
Sbjct:  113 AALKAVEQGAHVSLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVEELRHAKYEGILDGNPAITVVHGEARFKDEQSLVVRLNDGGERVVAFDRCLVATGASPAVPPIPG--LKESPYWTSTEALVSDTLP 270          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: DLDH_MYCGE (Dihydrolipoyl dehydrogenase OS=Mycoplasma genitalium GN=pdhD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDEKR--IVSSTGALALNEVP 672
            AA  A +  LKT  IEK+   GG CLNVGCIP+K LL  + +    +H+   +G+  +   ++D   ++ QK + V  L  G++ + K  KV  ++G    I  ++V V+     NT     NII+ATGS  +  +LPG    ++   I+ ST ALAL  VP
Sbjct:   17 AAEYAGKHKLKTLVIEKQ-YFGGVCLNVGCIPTKTLLKRAKIIDYLVHA-KDYGITINGQAKLDWKQLLKQKQEVVDKLVAGVKTIIKGAKVESIEGEATVIDKNKVQVN-----NTTYTTNNIIVATGSRPRYLTLPGFEKAQQAGFIIDSTQALALEGVP 171          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: MERA_PSEFL (Mercuric reductase OS=Pseudomonas fluorescens GN=merA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.987e-14
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVP 672
            AA+KA + G   T IE RG +GGTC+N+GC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T + G  +F     + V   EGG   V     ++ATG+   V  +PG  + E    +ST AL  + +P
Sbjct:  100 AALKAVEQGATVTLIE-RGTIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQSLVVRLNEGGEREVTFDRCLVATGASPAVPPIPG--LKESPYWTSTEALVSDTIP 257          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: MERA_BACCE (Mercuric reductase OS=Bacillus cereus GN=merA PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 57/160 (35.62%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNL-TRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATG--SDVKSLPGITIDEKRIVSSTGALALNEVP 672
            +AI+A  L  K   IE RG +GGTC+NVGC+PSK LL +  + H A ++    G+  S+  VDL  ++ QK+  V+ +       L        +KG  KF++ + V V+    GN +   K  +IATG  S   ++PG  +DE   ++ST  L L +VP
Sbjct:  184 SAIEAVALNAKVAMIE-RGTVGGTCVNVGCVPSKTLLRAGEINHLAKNN-PFVGLHTSASNVDLAPLVKQKNDLVTEMRNEKYVNLIDDYGFELIKGESKFVNENTVEVN----GNQIT-AKRFLIATGASSTAPNIPG--LDEVDYLTSTSLLELKKVP 334          
BLAST of CX295309 vs. ExPASy Swiss-Prot
Match: MERA_STRLI (Mercuric reductase OS=Streptomyces lividans GN=merA PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 1
Query:  202 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNL-TRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT-IDEKRIVSSTGALALNEVP 672
            AAI A   G     +E RG  GGTC+NVGC+PSKALL ++   H A  +    G++ +   +D PA+++ KD  V  L       L  +     V G   F     + V   +GG   V+  + +IATGS   + P I  +D+   ++ST A+ L ++P
Sbjct:   22 AAIAARNKGRSVVMVE-RGTTGGTCVNVGCVPSKALLAAAEARHGAQAASRFPGIQATEPALDFPALISGKDTLVGQLRAEKYTDLAAEYGWQIVHGTATFADGPMLEVALNDGGTATVEAAHYLIATGS-APTAPHIDGLDQVDYLTSTTAMELQQLP 178          
The following BLAST results are available for this feature:
BLAST of CX295309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
STHA_MYCBT4.003e-1532.08Soluble pyridine nucleotide transhydrogenase OS=My... [more]
STHA_MYCBP4.003e-1532.08Soluble pyridine nucleotide transhydrogenase OS=My... [more]
STHA_MYCBO4.003e-1532.08Probable soluble pyridine nucleotide transhydrogen... [more]
MERA_ENTAG5.228e-1534.16Mercuric reductase OS=Enterobacter agglomerans GN=... [more]
MERA_SERMA1.165e-1432.70Mercuric reductase (Fragments) OS=Serratia marcesc... [more]
MERA_ACICA1.521e-1432.92Mercuric reductase OS=Acinetobacter calcoaceticus ... [more]
DLDH_MYCGE1.521e-1435.80Dihydrolipoyl dehydrogenase OS=Mycoplasma genitali... [more]
MERA_PSEFL1.987e-1432.30Mercuric reductase OS=Pseudomonas fluorescens GN=m... [more]
MERA_BACCE3.389e-1435.63Mercuric reductase OS=Bacillus cereus GN=merA PE=1... [more]
MERA_STRLI1.682e-1333.33Mercuric reductase OS=Streptomyces lividans GN=mer... [more]

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Properties
Property NameValue
Genbank descriptionC05070H03SK PhIFruit1 Citrus clementina cDNA clone C05070H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295309 ID=CX295309; Name=CX295309; organism=Citrus clementina; type=EST; length=672bp
CGATTGATTGGAGAAAAAGTTGATTGAAAAATGGCGATGGCAAGTCTTGC
AAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACTCGTCGAATG
GTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTCGCTTCGGCA
TCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGGTGGTTACGT
GGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGTGCATCGAGA
AGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGCATCCCCTCT
AAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCATGCATTCTTT
TGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATTTGCCTGCTA
TGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGAGGTATTGAA
GGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATATGGCAAGTT
TATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTGGAAACACTG
TCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGACGTTAAGTCT
CTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATCCACTGGAGC
TTTAGCATTGAATGAAGTTCCT
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