CX295324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 42/94 (44.68%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 12 GLEELFEQLS------ANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 G E L + L+ GRRG PPAA+SAI+A+ T ++ C VC+D +G +++PC H YH DCIVPWL NSCPVCR +L Sbjct: 208 GYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQL 301
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase rnf181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 36 LSANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 LS +R PPPAA++ + ++P V I+ CPVC +FE R+MPC H++H+ CI+PWL + NSCP+CR ELP Sbjct: 44 LSDWDQRLPPPAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELP 124
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 60 PPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 PPPAA++ ++++P I+ ++D CPVC +FE +MPC+H++HS+CI+PWL + NSCP+CR ELP Sbjct: 63 PPPAAKAVVESLPRTVISSA--KADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 60 PPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 PPPAA++A++ +P R R +++ CPVC +FE A +MPC+H++HS+CI+PWL + NSCP+CR ELP Sbjct: 51 PPPAAKTAVENLP--RTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 121
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 60 PPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 PPPAA++ ++++P R R +++ CPVC +FE +MPC+H++HS+CI+PWL + NSCP+CR ELP Sbjct: 63 PPPAAKAVVESLP--RTVIRSSKAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 60 PPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 PPPAA++ ++ +P R R +++ CPVC +FE A +MPC+H++HS CI+PWL + NSCP+CR ELP Sbjct: 51 PPPAAKTVVENLP--RTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELP 121
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: PJA1_MOUSE (E3 ubiquitin-protein ligase Praja1 OS=Mus musculus GN=Pja1 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 29/85 (34.12%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 30 EQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 E L+ + PPA++ +IDA+P + +T+ H + + CP+C ++ G A ++PC+H +H C+ WL + +CPVCR P Sbjct: 491 ESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 575
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: PJA1_HUMAN (E3 ubiquitin-protein ligase Praja1 OS=Homo sapiens GN=PJA1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 29/85 (34.12%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 30 EQLSANGRRGPPPAARSAIDAMPTVRITQRH--LRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 E L+ + PPA++ +IDA+P + +T+ H + + CP+C ++ G A ++PC+H +H C+ WL + +CPVCR P Sbjct: 556 ESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 640
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe GN=SPAP32A8.03c PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 27/87 (31.03%), Postives = 45/87 (51.72%), Query Frame = 3 Query: 12 GLEELFEQL--SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCR 266 GL+++ QL A G P PA I M + + + + C +C + F++ + Q+PC H +H +CI PWL + +C +CR Sbjct: 351 GLDDIISQLMEQAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR 437 The following BLAST results are available for this feature:
BLAST of CX295324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295324 ID=CX295324; Name=CX295324; organism=Citrus clementina; type=EST; length=698bpback to top |