CX295334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_ARATH (30S ribosomal protein S8, chloroplastic OS=Arabidopsis thaliana GN=rps8 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.696e-49 Identity = 97/120 (80.83%), Postives = 107/120 (89.17%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKGTVRI STNITE++VKILLREGFIEN RK EN + FL+LTLRHRRN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 15 NADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYFLILTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_ARAHI (30S ribosomal protein S8, chloroplastic OS=Arabis hirsuta GN=rps8 PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.266e-48 Identity = 97/120 (80.83%), Postives = 107/120 (89.17%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKGTVRI STNITE++VKILLREGFIEN RK EN + FL+LTLRHRRN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 15 NADMNRKGTVRIESTNITESIVKILLREGFIENVRKHRENNQYFLILTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_OLIPU (30S ribosomal protein S8, chloroplastic OS=Olimarabidopsis pumila GN=rps8 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.684e-48 Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKGTVRI STNITE++VKILLREGFIEN RK E+ + FL+LTLRHRRN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 15 NADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRESNQYFLILTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_LOBMA (30S ribosomal protein S8, chloroplastic OS=Lobularia maritima GN=rps8 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.684e-48 Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKGTVRI STNITE++VKILLREGFIEN RK EN + FL+LTLRHRRN+K ++ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 15 NADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYFLILTLRHRRNKKESHKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_CAPBU (30S ribosomal protein S8, chloroplastic OS=Capsella bursa-pastoris GN=rps8 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.684e-48 Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKGTVRI STNITE++VKILLREGFIEN RK E+ + FL+LTLRHRRN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 15 NADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRESNQYFLILTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_AETGR (30S ribosomal protein S8, chloroplastic OS=Aethionema grandiflora GN=rps8 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.812e-48 Identity = 95/120 (79.17%), Postives = 106/120 (88.33%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKGTVRI STNITE++VKILLREGFIEN RK EN ++FL+LTLRHRRN+K Y+ I NLKRISRPGLRIY N +RI RIL G+GIVILSTSRGIMTDR ARL+R+GGEILCYIW Sbjct: 15 NADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENTQDFLILTLRHRRNKKESYKTIFNLKRISRPGLRIYSNSQRITRILGGIGIVILSTSRGIMTDREARLKRVGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_OENEH (30S ribosomal protein S8, chloroplastic OS=Oenothera elata subsp. hookeri GN=rps8 PE=3 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48 Identity = 99/124 (79.84%), Postives = 104/124 (83.87%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPI----LNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 N DMNRKGTVRI STN+ E +VKILLREGFIEN RK ENKK FLVLTLRHRRNRKGP LNLKRISRPGLR+Y NY++IPRIL GMGIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 15 NVDMNRKGTVRIESTNMAEKIVKILLREGFIENVRKHQENKKSFLVLTLRHRRNRKGPSPSRTFLNLNLKRISRPGLRVYSNYQKIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW 138
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_LOTJA (30S ribosomal protein S8, chloroplastic OS=Lotus japonicus GN=rps8 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.208e-48 Identity = 95/120 (79.17%), Postives = 104/120 (86.67%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRK TV+I TNITEN VKILLREGFIEN RK E+ K FLVLTLR+RRN KG Y+ LNLKRIS PGLRIY+NY++IPRIL GMGIVILSTSRGIMTDR ARLE+IGGE+LCYIW Sbjct: 15 NADMNRKRTVQIPFTNITENTVKILLREGFIENVRKHRESDKSFLVLTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREARLEKIGGEVLCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_CALFG (30S ribosomal protein S8, chloroplastic OS=Calycanthus floridus var. glaucus GN=rps8 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.208e-48 Identity = 99/120 (82.50%), Postives = 106/120 (88.33%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NA+M++KGTVRIASTNITEN+VKILLREGFIEN RK EN K FLV TL+HRRNRKG YR IL KRISRPGLRIY NY+RIPRIL GMGIVILSTS+GIMTDR ARLE IGGEILCYIW Sbjct: 15 NANMDKKGTVRIASTNITENIVKILLREGFIENVRKHQENNKYFLVSTLQHRRNRKGRYRTIL--KRISRPGLRIYSNYQRIPRILGGMGIVILSTSQGIMTDREARLEGIGGEILCYIW 132
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_LIRTU (30S ribosomal protein S8, chloroplastic OS=Liriodendron tulipifera GN=rps8 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.072e-47 Identity = 99/120 (82.50%), Postives = 105/120 (87.50%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADM++KGTVRIASTN+ E+VVKILLREGFIEN RK EN K FLV TLRHRRNRKG YR IL KRISRPGLRIY NY+RIPRIL GMGIVILSTSRGIMTDR ARLE IGGE+LCYIW Sbjct: 15 NADMDKKGTVRIASTNMAESVVKILLREGFIENVRKHRENNKYFLVSTLRHRRNRKGTYRNIL--KRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEVLCYIW 132 The following BLAST results are available for this feature:
BLAST of CX295334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295334 ID=CX295334; Name=CX295334; organism=Citrus clementina; type=EST; length=684bpback to top |