CX295334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_DRIGR (30S ribosomal protein S8, chloroplastic OS=Drimys granadensis GN=rps8 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.119e-47 Identity = 97/120 (80.83%), Postives = 105/120 (87.50%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADM++KGTVRIASTNITEN++KILLREGFIEN RK EN K L+LTLRHRRNRKG YR I LK ISRPGLRIY NY+RIPRIL G+GIVILSTSRGIMTDR ARL+ IGGEILCYIW Sbjct: 15 NADMDKKGTVRIASTNITENIIKILLREGFIENVRKHRENNKYLLILTLRHRRNRKGTYRNI--LKCISRPGLRIYSNYKRIPRILGGIGIVILSTSRGIMTDREARLKGIGGEILCYIW 132
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_PHAVU (30S ribosomal protein S8, chloroplastic OS=Phaseolus vulgaris GN=rps8 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47 Identity = 91/120 (75.83%), Postives = 104/120 (86.67%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NAD+N+KG V++ TNITE +VKILLREGF+EN RK EN K FLVLTLR+RRNRK Y+ LNLKRIS PGLRIY+NY++IPRIL GMGIVILSTSRGIMTDR ARLE+IGGE+LCYIW Sbjct: 15 NADINKKGMVQLPFTNITEKIVKILLREGFVENIRKHRENDKSFLVLTLRYRRNRKESYKSFLNLKRISTPGLRIYYNYKKIPRILGGMGIVILSTSRGIMTDREARLEKIGGEVLCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_LEPVR (30S ribosomal protein S8, chloroplastic OS=Lepidium virginicum GN=rps8 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47 Identity = 94/120 (78.33%), Postives = 105/120 (87.50%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKGTVRI STNITE++VKILLREGFIEN RK EN + FL+LTLRH+RN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR AR + IGGEILCYIW Sbjct: 15 NADMNRKGTVRIRSTNITESIVKILLREGFIENVRKHRENNQYFLILTLRHKRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARRKSIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_MORIN (30S ribosomal protein S8, chloroplastic OS=Morus indica GN=rps8 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47 Identity = 97/122 (79.51%), Postives = 104/122 (85.25%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRR--NRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMN+K TVRI TNITEN++KILLREGFIEN RK E+ F VLTLRHRR NRKGP + +LNLKRISRPGLRIY NY+RIPRIL GMGIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 15 NADMNKKRTVRIPYTNITENILKILLREGFIENMRKHQESNNLFFVLTLRHRRKRNRKGPDKTVLNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW 136
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_DRANE (30S ribosomal protein S8, chloroplastic OS=Draba nemorosa GN=rps8 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47 Identity = 93/120 (77.50%), Postives = 104/120 (86.67%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMNRKG VRI STNITE++VKILLREGF+EN RK EN FL+LTLRHRRN+K Y+ LNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL++IGGEILCYIW Sbjct: 15 NADMNRKGMVRIESTNITESIVKILLREGFVENVRKHRENNHYFLILTLRHRRNKKESYKTFLNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKKIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_CHLSC (30S ribosomal protein S8, chloroplastic OS=Chloranthus spicatus GN=rps8 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.185e-46 Identity = 100/122 (81.97%), Postives = 105/122 (86.07%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNI--TENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADM +KGTVRIASTNI +EN+V+ILLREGFIEN RK EN K FLV TLRHRRNRKG YR IL KRISRPGLRIY NY+RIPRIL GMGIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 15 NADMEKKGTVRIASTNINISENIVQILLREGFIENVRKHRENNKYFLVSTLRHRRNRKGAYRNIL--KRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW 134
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_ILLOL (30S ribosomal protein S8, chloroplastic OS=Illicium oligandrum GN=rps8 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.548e-46 Identity = 98/120 (81.67%), Postives = 102/120 (85.00%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADM KG VRIASTNITEN+VKILLREGFIEN RK E+ K FLV TLRHRRNRKG YR IL KRISRPGLRIY NY+ IPRIL GMG+VILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 15 NADMGTKGMVRIASTNITENIVKILLREGFIENVRKHRESNKYFLVSTLRHRRNRKGTYRNIL--KRISRPGLRIYSNYQGIPRILGGMGVVILSTSRGIMTDREARLEGIGGEILCYIW 132
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_DIOEL (30S ribosomal protein S8, chloroplastic OS=Dioscorea elephantipes GN=rps8 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.640e-46 Identity = 95/120 (79.17%), Postives = 106/120 (88.33%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADM++KGTVRIASTNITEN+VKILLREGFIEN RK EN++ FLV TLRHRR KG YR IL KRISRPGLRIY NY+RIP+IL G+GIVILSTS+GIMTDR ARL++IGGEILCYIW Sbjct: 15 NADMDKKGTVRIASTNITENIVKILLREGFIENVRKHQENQRFFLVSTLRHRRTSKGVYRTIL--KRISRPGLRIYSNYQRIPKILGGIGIVILSTSQGIMTDREARLKKIGGEILCYIW 132
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_NYMAL (30S ribosomal protein S8, chloroplastic OS=Nymphaea alba GN=rps8 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46 Identity = 97/120 (80.83%), Postives = 104/120 (86.67%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADM++KGTVRI STNITEN+VKILLREGFIEN RK EN K+FLVLTLRHRRNRK YR I LKRISRPGLRIY N +RIPRI G+G+VILSTSRGIMTDR ARLERIGGEIL YIW Sbjct: 15 NADMDKKGTVRIPSTNITENIVKILLREGFIENVRKHRENNKDFLVLTLRHRRNRKRAYRNI--LKRISRPGLRIYSNSQRIPRISGGIGVVILSTSRGIMTDREARLERIGGEILFYIW 132
BLAST of CX295334 vs. ExPASy Swiss-Prot
Match: RR8_PHAAN (30S ribosomal protein S8, chloroplastic OS=Phaseolus angularis GN=rps8 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.682e-46 Identity = 91/120 (75.83%), Postives = 103/120 (85.83%), Query Frame = -2 Query: 324 NADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 683 NADMN+KG V++ TNITE +VKILLREGF+EN RK EN K FLVLTLR+RRNRK + LNLKRIS PGLRIY+NY++IPRIL GMGIVILSTSRGIMTDR ARLE+IGGE+LCYIW Sbjct: 15 NADMNKKGMVQLPFTNITEKIVKILLREGFVENIRKHRENNKYFLVLTLRYRRNRKESSKNFLNLKRISTPGLRIYYNYQQIPRILGGMGIVILSTSRGIMTDREARLEKIGGEVLCYIW 134 The following BLAST results are available for this feature:
BLAST of CX295334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295334 ID=CX295334; Name=CX295334; organism=Citrus clementina; type=EST; length=684bpback to top |