CX295345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y525_THESM (DNA-binding protein TSIB_0525 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0525 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12 Identity = 40/99 (40.40%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 77 ELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 ++E IR++++ EL Q+ + Q+ +E+ Q QE E + + Q ++ QIL++EARERL R+ LV+PE AR VE I+++ Q GQI E++++E+L +L Sbjct: 4 DIEEIRRKKLLEL--QKKLAEQKRAEEEQIRQE---MELEAQLQAIMKQILTSEARERLTRVKLVRPELARQVELILVQLYQAGQITERITDEKLKRIL 97
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y117_METBU (DNA-binding protein Mbur_0117 OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_0117 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12 Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 77 ELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 +LEAIRQ+R+ EL QQ S QN Q QE A+ E DE+ + +L Q+++ EARERL R+ L + E +E ++ AQ G++ K+ +E+L LL Sbjct: 3 DLEAIRQKRLAELQQQQS--SPQNDAQAAYQQEQAQAERDEQVKAVLRQVMTPEARERLTRLRLSRKELVEQLESQLVMLAQNGRLQTKIDDEKLKVLL 99
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y1060_PYRHO (DNA-binding protein PH1060 OS=Pyrococcus horikoshii GN=PH1060 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12 Identity = 44/107 (41.12%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 62 QMADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREA---DERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 +MA+ ++E IR+R++ EL Q+ + QKAQE+A+R+ + + Q +L +IL+ EARERLAR+ LV+PE AR VE I+++ Q GQI E++ + +L +L Sbjct: 3 EMAE-DIEEIRRRKLMEL--------QRKYLEQQKAQEEAERQQALIEAQIQAILRKILTPEARERLARVKLVRPELARQVELILVQLYQAGQITERIDDAKLKRIL 100
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y204_PICTO (DNA-binding protein PTO0204 OS=Picrophilus torridus GN=PTO0204 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 71 DPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 D EL+ IR+R+M E + +++ Q+ A E + RRQ +L QILS EARERL+R+ LV+P+ VE+ +++ A MG+I + +S+ L S+L Sbjct: 4 DDELDEIRRRKMAEYQ------NMMQERAYEEEQKKAAAEEEARRQQILRQILSPEARERLSRLKLVRPDLVENVENQLIQLAGMGRINKVISDNELKSIL 98
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y008_THEVO (DNA-binding protein TV0008 OS=Thermoplasma volcanium GN=TV0008 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-11 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 71 DPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADE--RRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 D ELE IR+R+M+EL Q+ + Q Q A+E+ K+ E RRQ +L QIL ARERL + LV+P+ A VE+ +++ A MG+I + E +I +L Sbjct: 4 DEELEKIRRRQMEEL--------QRQAMQRQMAEEEEKQREIEKARRQQILRQILDPSARERLNNVRLVRPDLADNVENQLIQLASMGRINRIIKESDIIDIL 98
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y157_METMP (DNA-binding protein MMP0157 OS=Methanococcus maripaludis GN=MMP0157 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 37/98 (37.76%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 83 EAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLE 376 E IRQRR+QE+ A+ N + Q+ ++ + + + ++Q +L QILS EAR RLARI L KP+ A VE +++ AQ G++ +++E LL+ Sbjct: 4 EEIRQRRLQEMQAKAQAQGAANDPEAQRQMQEQQMQYEMQKQKILRQILSEEARSRLARIKLAKPQFAEQVEMQLIQLAQAGKLPVPLTDEYFKGLLD 101
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y925_PYRAB (DNA-binding protein PYRAB09250 OS=Pyrococcus abyssi GN=PYRAB09250 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11 Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 77 ELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREA---DERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 ++E IR+R++ EL Q+ + QKAQE+ R+ + + Q +L +IL+ EARERLAR+ LV+PE AR VE I+++ Q GQI E++ + +L +L Sbjct: 7 DIEEIRRRKLLEL--------QRKYLEQQKAQEEEARQQALIEAQIQAILRKILTPEARERLARVRLVRPELARQVELILVQLYQAGQITERIDDAKLKKIL 100
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y455_METBF (DNA-binding protein Mbar_A0455 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A0455 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 71 DPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 D EL IR+RR+ E+ QQ +QQ+ Q QE AK E + ++Q +L QIL+ EARERL + + +P +E ++ AQ G++ ++S+E+L +LL Sbjct: 8 DDELNEIRKRRLAEIQRQQAQ-NQQSDIQAAYQQEQAKAEMEAQKQAILRQILTPEARERLTTLKMSRPAIGEQLEMQLISLAQSGRLPSQISDEQLKTLL 107
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y3016_METHJ (DNA-binding protein Mhun_3016 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=Mhun_3016 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 65 MADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLE 376 MA+ EL IR+R+M E M Q QQ+ E+ Q + + + QM L QIL EARERL I L KP+ AR VE ++ AQ G+I K+S+++L +L+ Sbjct: 1 MAEDELAEIRRRKMAE-MQQHAAMQQQDMERQQ--------QYEAQMQMALMQILEPEARERLNTIKLTKPDFARAVEQQLVMLAQSGRIKNKISDDQLKVILQ 95
BLAST of CX295345 vs. ExPASy Swiss-Prot
Match: Y1886_METB6 (DNA-binding protein Mboo_1886 OS=Methanoregula boonei (strain 6A8) GN=Mboo_1886 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11 Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 65 MADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 373 M D EL IR+RRM +L QQ G QQ ++ + Q+ K + QM+L Q+L +ARERL I L KP+ A VE ++ AQ G++ +K+++ +L LL Sbjct: 1 MGDDELSEIRKRRMAQL--QQQAGDQQAMQEEVERQQRLKSQI----QMVLMQVLEPDARERLNTIRLTKPDFASAVEQQLVMLAQSGRLRQKITDAQLKDLL 97 The following BLAST results are available for this feature:
BLAST of CX295345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295345 ID=CX295345; Name=CX295345; organism=Citrus clementina; type=EST; length=637bpback to top |