CX295346

Overview
NameCX295346
Unique NameCX295346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 2 
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL  ++  KLSDFGLA+ GP GD THV+T  VGT+GYAAPEYV TG
Sbjct:  225 LLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTG 270
The following BLAST results are available for this feature:
BLAST of CX295346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
Y5707_ARATH5.506e-1167.39Probable receptor-like protein kinase At5g47070 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05071C04SK PhIFruit1 Citrus clementina cDNA clone C05071C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295346 ID=CX295346; Name=CX295346; organism=Citrus clementina; type=EST; length=745bp
ACGAGGTCTGTCCTCAGTTTAATGAGTTCTTAGTATGGAATTACTTCAAC
AGGAATATAATGCCAAGCTTTCAGATTTTGGTCTTGCAAAAGCAGGCCCT
CAAGGGGACAAAACACATGTTTCTACTAGGGTTGTAGGAACATATGGCTA
TGCGGCTCCAGAGTATGTTATGACAGGTGAGACATTTCAGGAGGCGTTTG
AACAAAATGAACCATAGACTCTGGCTTGGCACTAGACCTTTTAGAGGATT
TGGAGTCACCATTAAAAATGGTTTGAATCTCTACACACCAATGTAGAAGG
AATTATGTGTGCAAATTCATGCAAATAGGCATTTTGTTAAAAAGTTTCTC
TATCAGCTGGGCAAGAATATTGTTCTTGCGCGAGTTGTGTGGCACGTAAC
ATTCACGGAGACACACTGAACACAAATTTTTCTTTAATTGAAGTACACCT
CTTTTCTCACCATATTTTGTACATGTATTGTACATATTCAACATGTTGAT
CTAATGAGTATAATGTTATTTGGCATTCACTATCCAACTCTTCGTGCACC
AAACCTGACATATAGTATTTGAGTTCAGATGCTTTAGGTCTTTGTCTAGA
AGCAAGTGGTTTACTGGAGTTTTCTGTATCACTGGAAATTTGGGGACCTA
AGAATATCAAACTATGCCCTTTTCTTTTCCAGGACACCTGACGTCTAAGA
GTGATGTTTACAGCTTTGGCGTAGTGCTGCTTGAGATTTTGACAG
back to top