CX295347

Overview
NameCX295347
Unique NameCX295347
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UGDH_CAEEL (UDP-glucose 6-dehydrogenase OS=Caenorhabditis elegans GN=sqv-4 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.212e-77
Identity = 136/214 (63.55%), Postives = 178/214 (83.18%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRD 654
            GTA++DL NPDRVLIGG  +PEG +AV  L  +Y +WVP +RI+TTN WS+ELSKL ANAFLAQRISS+N++SA+CEATGA +S+VA AVG D+RIG KFL ASVGFGGSCFQKD+L+LVY+CE   LP+VA+YW+ VI IN++Q+ RF ++++A +FNTV++KKIA+ GFAFKK+TGDTRE+ AI V K L+ + A+LS+YDP+V + Q+  D
Sbjct:  173 GTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLND 386          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: TUAD_BACSU (UDP-glucose 6-dehydrogenase tuaD OS=Bacillus subtilis GN=tuaD PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.332e-33
Identity = 84/204 (41.18%), Postives = 122/204 (59.80%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDP 624
            G+AI D  N +R +IG        KA   +++++  +     ++ TNL SAE+ K AANAFLA +IS +N ++ +CE  GA+VS+VA  VG DSRIG KFL A +GFGGSCF KD   L+ I +  G P   +  + VI+ N+ Q+   V++++  M  +V  + I+VLG AFK +T D R  PA+D+   L    A +  YDP
Sbjct:  157 GSAIHDTMNMERAVIGSTS----HKAAAIIEELHQPF--HAPVIKTNLESAEMIKYAANAFLATKISFINDIANICERVGADVSKVADGVGLDSRIGRKFLKAGIGFGGSCFPKDTTALLQIAKSAGYP--FKLIEAVIETNEKQRVHIVDKLLTVM-GSVKGRTISVLGLAFKPNTNDVRSAPALDIIPMLQQLGAHVKAYDP 351          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UDG_RHIME (UDP-glucose 6-dehydrogenase OS=Rhizobium meliloti GN=rkpK PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.026e-32
Identity = 82/210 (39.05%), Postives = 124/210 (59.05%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH-WVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTED 639
            G AI+D   PDR++IG  +  +G +A + + +VY   ++ +  ++ T   ++EL K A NAFLA +I+ +N ++ LCE  GANV  VA  +G D RIG KFL+A  G+GGSCF KD L LV   + +  P      +  + +ND +K     +V+A+    +   KIAVLG  FK +T D R++PAI V + L    AR++ YDP+  E+
Sbjct:  156 GAAIEDFKRPDRIVIGV-DGSDG-RAREVMTEVYRPLYLNQSPLVFTTRRTSELIKYAGNAFLAMKITFINEIADLCEKVGANVQDVARGIGLDGRIGSKFLHAGPGYGGSCFPKDTLALVKTAQDHDTP--VRLVETTVAVNDNRKRAMGRKVIAAAGGDIRGSKIAVLGLTFKPNTDDMRDSPAIAVVQALQDAGARVTGYDPEGMEN 361          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: YWQF_BACSU (UDP-glucose 6-dehydrogenase ywqF OS=Bacillus subtilis GN=ywqF PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.456e-32
Identity = 80/204 (39.22%), Postives = 123/204 (60.29%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDP 624
            G+AI D F+ DR++IG  +    +K    L++++  +  +  I  T++ SAE+ K A+NAFLA +IS +N +S +CE  GA++  VA+ +G D RIG +FL A +G+GGSCF KD   LV I     +    E  K VIK+N+ Q++  V++ + +    V+ K IA+LG +FK +T D RE P+I +   L    AR+  YDP
Sbjct:  156 GSAIYDTFHGDRIVIGTAD----EKTANTLEELFRPF--QIPIYQTDIRSAEMIKYASNAFLATKISFINEISNICEKVGADIEAVAYGMGQDKRIGSQFLKAGIGYGGSCFPKDTNALVQI--AGNVEHDFELLKSVIKVNNNQQAMLVDKAL-NRLGGVTGKTIALLGLSFKPNTDDMREAPSIVIADRLAALDARIRAYDP 350          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UDG_RICFE (UDP-glucose 6-dehydrogenase OS=Rickettsia felis GN=udg PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.456e-32
Identity = 76/205 (37.07%), Postives = 120/205 (58.54%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-RILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDP 624
            G+A++D   PDR+++G       +++ + L+ +YA  + +  + + T+L ++EL K A+N+FLA +I+ +N M+ LCE  G N+  ++  VG D RIG  FLNA  GFGGSCF KDIL L  + E + +    +  K VIK N  + S  V+++   +   +  K IAVLG  +K  T D R +PAI++ K LL     +  +DP
Sbjct:  153 GSAVEDFLYPDRIVVG----VNNKESEEILRKIYAPLIEQGAKFVVTDLVTSELIKYASNSFLATKIAFINEMADLCEKIGGNIEDLSKGVGLDQRIGQNFLNAGPGFGGSCFPKDILALNNLVENHHID--CKILKAVIKSNKQRPSNMVDKIATLLDGDLKGKNIAVLGLTYKAGTDDVRASPAIEIVKILLNKDVYVKAFDP 351          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UDG_RICTY (UDP-glucose 6-dehydrogenase OS=Rickettsia typhi GN=udg PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.313e-31
Identity = 80/210 (38.10%), Postives = 118/210 (56.19%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-RILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDIL---NLV--YICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDP 624
            G+A++D   PDR+++G       Q++   L+ +YA  + +  + L TNL ++EL K A+N+FLA +I+ +N M+ LCE  GAN+  ++  VG D RIG  FLNA  GFGGSCF KDIL   NLV  Y  +C  L       K VIK N  +    V ++   +   +  + IA+LG  +K  T D R +PAI++   LL     +  +DP
Sbjct:  153 GSAVEDFLYPDRIVVG----VNNQESEALLRTIYAPLIEQGVKFLVTNLVTSELIKYASNSFLATKIAFINEMADLCEKIGANIKDLSQGVGLDQRIGRNFLNAGPGFGGSCFPKDILALNNLVENYKIDCKIL-------KSVIKSNKLRPGNMVAKIATLLDGDLKGRNIAILGLTYKAGTDDVRASPAIEIITILLNKDVYVKAFDP 351          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UDG_RICPR (UDP-glucose 6-dehydrogenase OS=Rickettsia prowazekii GN=udg PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.240e-31
Identity = 75/205 (36.59%), Postives = 117/205 (57.07%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-RILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDP 624
            G+A++D   PDR+++G       +++   L+ +YA  + +  + L TNL ++EL K  +N+FLA +I+ +N M+ LCE  GAN+  ++  VG D RIG  FLNA  GFGGSCF KDIL L  + E + +    +  K VIK N  + S  V ++   +   +  + IA+LG  +K  T D R +PAI++   LL     +  +DP
Sbjct:  153 GSAVEDFLYPDRIVVG----VNNKESEALLRKIYAPLIEQGAKFLVTNLVTSELIKYVSNSFLATKIAFINEMADLCEKIGANIKDLSQGVGLDQRIGRNFLNAGPGFGGSCFPKDILALNNLVENHKID--CKILKSVIKSNKLRPSNMVAKIATLLDGDLKGRNIAILGLTYKAGTDDVRASPAIEIITILLNKDVYVKAFDP 351          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UDG_RICCN (UDP-glucose 6-dehydrogenase OS=Rickettsia conorii GN=udg PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30
Identity = 76/204 (37.25%), Postives = 116/204 (56.86%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDP 624
            G+A++D   PDR++IG       +++   L+ +YA  +   + + T+L ++EL K A+N+FLA +I+ +N M+ LCE  G N+  ++  VG D RIG  FLNA  GFGGSCF KDIL L  + E + +       K VIK N  + S  V+++   +   +  K IA+LG  +K  T D R +PAI + K LL     +  +DP
Sbjct:  153 GSAVEDFLYPDRIVIG----VNNKESEAILRKIYAP-LQGVKFVVTDLVTSELIKYASNSFLATKIAFINEMADLCEKIGGNIKDLSKGVGLDQRIGQNFLNAGPGFGGSCFPKDILALNNLVENHHID--CRILKAVIKSNKQRPSNMVDKIATLLDGDLKGKNIAILGLTYKAGTDDVRASPAIAIVKILLNKDVYVKAFDP 349          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UDG_RICBR (UDP-glucose 6-dehydrogenase OS=Rickettsia bellii (strain RML369-C) GN=udg PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30
Identity = 75/210 (35.71%), Postives = 118/210 (56.19%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-RILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTED 639
            G A++D   PDR++IG       +++   L+ +Y         ++ T+L +AEL K  +N+FLA +I+ +N M+ LCE  GA++  ++  +G D RIG  FLNA  GFGGSCF KDIL L  I + N +   ++  + VI+ N  + S  V+++   +   +  K IAVLG  +K  T D R +PAI++ K LL     +  +DP   E+
Sbjct:  153 GNAVEDFLYPDRIVIG----VNNKESEDILRKIYMPLTDNGAELVITDLVTAELIKYGSNSFLATKIAFINEMANLCEKIGADIKNLSKGIGLDKRIGTAFLNAGPGFGGSCFPKDILALNSIIKNNYID--SKILEAVIRSNKERPSLMVDKIATLLDEDLKGKNIAVLGLTYKAGTDDVRASPAIEIIKNLLDKGTYVKAFDPMGLEN 356          
BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: YTCA_BACSU (Putative UDP-glucose 6-dehydrogenase ytcA OS=Bacillus subtilis GN=ytcA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.165e-28
Identity = 73/205 (35.61%), Postives = 114/205 (55.61%), Query Frame = 1
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQ 627
            G A+ D+ +PD+ +IG +E      A+  +K +Y H   +   + T+L  AEL K A N FLA +IS +N M+ +CEA  +++S ++ A+G D RIG  FL A +G+GGSCF KD+  L +  +           + V  IND Q   ++ + + S F T+  KK AVLG +FK +T D R + A+ + + L      +  YDP+
Sbjct:  153 GNALYDMLHPDKTVIGVQEEDHVSAAI--VKSIYKHI--DTPFIVTSLAGAELIKYANNFFLAAKISFINEMARICEAYQSDISDISRAIGLDPRIGKHFLQAGIGYGGSCFPKDLQALQFAAQEKNTETF--LLRAVQHINDTQLGLYIKK-IQSFFETLQGKKAAVLGISFKPNTDDIRNSQAVRLMERLAELGCDVHAYDPE 350          
The following BLAST results are available for this feature:
BLAST of CX295347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
UGDH_CAEEL1.212e-7763.55UDP-glucose 6-dehydrogenase OS=Caenorhabditis eleg... [more]
TUAD_BACSU5.332e-3341.18UDP-glucose 6-dehydrogenase tuaD OS=Bacillus subti... [more]
UDG_RHIME2.026e-3239.05UDP-glucose 6-dehydrogenase OS=Rhizobium meliloti ... [more]
YWQF_BACSU3.456e-3239.22UDP-glucose 6-dehydrogenase ywqF OS=Bacillus subti... [more]
UDG_RICFE3.456e-3237.07UDP-glucose 6-dehydrogenase OS=Rickettsia felis GN... [more]
UDG_RICTY1.313e-3138.10UDP-glucose 6-dehydrogenase OS=Rickettsia typhi GN... [more]
UDG_RICPR2.240e-3136.59UDP-glucose 6-dehydrogenase OS=Rickettsia prowazek... [more]
UDG_RICCN1.112e-3037.25UDP-glucose 6-dehydrogenase OS=Rickettsia conorii ... [more]
UDG_RICBR7.206e-3035.71UDP-glucose 6-dehydrogenase OS=Rickettsia bellii (... [more]
YTCA_BACSU5.165e-2835.61Putative UDP-glucose 6-dehydrogenase ytcA OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionC05071C05SK PhIFruit1 Citrus clementina cDNA clone C05071C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295347 ID=CX295347; Name=CX295347; organism=Citrus clementina; type=EST; length=654bp
GTTTCTTGCTGAGGGACTGCAATACAGGATCTTTTTAACCCAGATCGGGT
CCTTATCGGTGGTAGAGAAACGCCAGAAGGCCAGAAAGCCGTCAAAGCCT
TGAAGGATGTGTATGCACACTGGGTCCCAGAAGACCGAATTTTGACCACC
AACCTGTGGTCTGCAGAGCTTTCGAAGCTTGCAGCCAATGCTTTCTTGGC
ACAGAGGATCTCATCTGTTAATGCCATGTCAGCTCTCTGCGAGGCAACTG
GAGCTAATGTCAGTCAGGTGGCATTTGCTGTTGGTACAGACTCTAGGATT
GGGCCCAAATTCTTGAATGCTAGTGTTGGGTTCGGTGGCTCCTGCTTCCA
GAAGGATATTTTGAATCTGGTTTACATCTGCGAGTGCAATGGCCTTCCAG
AGGTGGCTGAGTACTGGAAACAAGTCATTAAGATCAATGATTACCAGAAA
AGCCGTTTTGTGAACCGCGTAGTTGCCTCTATGTTCAACACGGTTTCAAA
CAAGAAGATTGCCGTTCTGGGATTTGCCTTCAAGAAGGATACCGGTGACA
CCAGAGAGACCCCAGCCATTGATGTCTGCAAGGGGCTTTTGGGAGACAAA
GCTCGGTTGAGCATATACGACCCACAGGTCACCGAGGACCAGATCCAGAG
GGAC
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