CX295347

Overview
NameCX295347
Unique NameCX295347
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295347 vs. ExPASy Swiss-Prot
Match: UDG8_ECOLX (UDP-glucose 6-dehydrogenase OS=Escherichia coli GN=ugd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11
Identity = 53/209 (25.36%), Postives = 88/209 (42.11%), Query Frame = 1 
Query:   13 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTED 639
            G A+ D  +P R++IG R     + A    +      +P    L T+   AE  KL AN +LA R++  N + +  E+ G N  Q+   V  D RIG  + N S G+GG C  KD   L  +     +P        +  I D  ++R     +A    +   + + +     K  + + R +    + K +      + IY+P + ED
Sbjct:  146 GKALYDNLHPSRIVIGERSERAERFAALLQEGAIKQNIPT---LFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQL--LANYQSVPN-----NLISAIVDANRTR--KDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMKED 342
The following BLAST results are available for this feature:
BLAST of CX295347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
UDG8_ECOLX7.492e-1125.36UDP-glucose 6-dehydrogenase OS=Escherichia coli GN... [more]

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Properties
Property NameValue
Genbank descriptionC05071C05SK PhIFruit1 Citrus clementina cDNA clone C05071C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295347 ID=CX295347; Name=CX295347; organism=Citrus clementina; type=EST; length=654bp
GTTTCTTGCTGAGGGACTGCAATACAGGATCTTTTTAACCCAGATCGGGT
CCTTATCGGTGGTAGAGAAACGCCAGAAGGCCAGAAAGCCGTCAAAGCCT
TGAAGGATGTGTATGCACACTGGGTCCCAGAAGACCGAATTTTGACCACC
AACCTGTGGTCTGCAGAGCTTTCGAAGCTTGCAGCCAATGCTTTCTTGGC
ACAGAGGATCTCATCTGTTAATGCCATGTCAGCTCTCTGCGAGGCAACTG
GAGCTAATGTCAGTCAGGTGGCATTTGCTGTTGGTACAGACTCTAGGATT
GGGCCCAAATTCTTGAATGCTAGTGTTGGGTTCGGTGGCTCCTGCTTCCA
GAAGGATATTTTGAATCTGGTTTACATCTGCGAGTGCAATGGCCTTCCAG
AGGTGGCTGAGTACTGGAAACAAGTCATTAAGATCAATGATTACCAGAAA
AGCCGTTTTGTGAACCGCGTAGTTGCCTCTATGTTCAACACGGTTTCAAA
CAAGAAGATTGCCGTTCTGGGATTTGCCTTCAAGAAGGATACCGGTGACA
CCAGAGAGACCCCAGCCATTGATGTCTGCAAGGGGCTTTTGGGAGACAAA
GCTCGGTTGAGCATATACGACCCACAGGTCACCGAGGACCAGATCCAGAG
GGAC
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