CX295352

Overview
NameCX295352
Unique NameCX295352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295352 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28
Identity = 68/174 (39.08%), Postives = 105/174 (60.34%), Query Frame = 2
Query:   71 QSEKLYEYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVV 592
            +   L++Y+L  S+  RE   L+ +R LT + P    M   ++AQ L+ L +LI AK  +++G FTGYS LA ALA+P+ G+++  ++  E  + G P+ ++A V  KID R  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GGV+     LW G V+
Sbjct:   50 EDNPLWQYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPEAGRVVTCEVDAEPPKLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGE-AGTFDIAVVDADKENCTAYYERCLQLLRPGGVLAVLRVLWRGEVL 220          
BLAST of CX295352 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28
Identity = 66/185 (35.68%), Postives = 115/185 (62.16%), Query Frame = 2
Query:  122 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVD 676
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ E+ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++ GG+I  DN L  G  VA P+A+++  ++    +++ LN  +  D
Sbjct:   35 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLV----AIRALNDKILAD 210          
BLAST of CX295352 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.065e-27
Identity = 65/185 (35.14%), Postives = 115/185 (62.16%), Query Frame = 2
Query:  122 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVD 676
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ ++ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++ GG+I  DN L  G  VA P+A+++  ++    +++ LN  +  D
Sbjct:   34 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLV----AIRALNDKILAD 209          
The following BLAST results are available for this feature:
BLAST of CX295352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CMTD1_MOUSE9.269e-2839.08Catechol-O-methyltransferase domain-containing pro... [more]
CAMT2_DICDI9.269e-2835.68Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI2.065e-2735.14Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC05071C10SK PhIFruit1 Citrus clementina cDNA clone C05071C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295352 ID=CX295352; Name=CX295352; organism=Citrus clementina; type=EST; length=676bp
GAATCGGGAAGGTCAGGAGGAAAACAAGGATCGTTACTACAAAACTCTAC
ATGGGAACAAGACCCTTTTACAGAGTGAAAAACTTTATGAGTATATACTT
GAAACCAGTGTATATCCAAGAGAACCACAATGCTTGAAGGAGATCCGCGA
GTTGACGGACAAGCATCCATGGAGCGCCATGATGACTGCACCTGATGAAG
CACAATTTTTGAGCATGCTACTCAAGCTTATCAATGCCAAGAATACCATG
GAAATTGGCGTTTTCACTGGTTACTCTCTCCTAGCCACTGCCCTCGCCAT
TCCCGACGATGGCAAGATACTGGCCCTGGACATCACCAAGGAACACTACG
AGAAGGGTCTCCCTATAATTCAAAAAGCTGGTGTTGCCCACAAGATTGAT
TTCAGAGAAGGCCCTGCTCTTCCTCTTCTTGATCAATTGATCCAAGACGA
AAAATATCATGGGACATTCGACTTCGTCTTTGTTGATGCTGACAAGAATA
ACTACATTAATTACCACAAGAGGCTTATTGAGCTTGTGAAGGTTGGGGGA
GTGATTGGCTACGACAACACCTTGTGGGGTGGATCTGTGGTGGCACAACC
TGATGCCGACCTGGATGAGCTAATCTTAGGCTGGAGGGATTCTGTGCAGG
AACTCAACAAGGCCCTGGCCGTTGAT
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