CX295354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIB_HUMAN (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 256.144 bits (653), Expect = 1.197e-67 Identity = 121/205 (59.02%), Postives = 162/205 (79.02%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ ++ L+KRF+ PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + T R++ K+ L + IDF GHALAL+R D YL++P +T Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.197e-67 Identity = 121/204 (59.31%), Postives = 157/204 (76.96%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL EC+LSGLLSVDG KVLH+DRNDYYG +S+SLNL QL+ FR EQ P LG RD+ VD++PKF++ANG L +LI+TDVT+Y+ FK + GS+VY G++ KVP +MEALKSPLM +FEKRRA+KF +V +Y E+DP T++ +++ R + + K+GL T DFIGHA+AL+ DD YL +PA +T Sbjct: 1 MDEEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQRPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGTQDFIGHAMALYLDDAYLKKPARET 204
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 2.666e-67 Identity = 119/205 (58.05%), Postives = 164/205 (80.00%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGGES+S+ ++ L+KRF+ QPPA +G RD+NVD+IPKF++ANG LV++L+ T+VT+Y+ FK ++GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPGQPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIB_PONAB (Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.666e-67 Identity = 120/205 (58.54%), Postives = 162/205 (79.02%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ ++ L+KR++ PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + T R++ K+ L + IDF GHALAL+R D YL++P +T Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRYKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIB_MOUSE (Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.666e-67 Identity = 119/205 (58.05%), Postives = 164/205 (80.00%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGGES+S+ ++ L+KRF+ QPPA +G RD+NVD+IPKF++ANG LV++L+ T+VT+Y+ FK ++GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPGQPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIB_CANFA (Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.257e-66 Identity = 119/205 (58.05%), Postives = 161/205 (78.54%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 M+EEYDVIVLGTGL ECILSG+++V+G KVLHMDRN YYGGES+S+ ++ L+KRF+ PPA +G RD+N+D+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + E+ K+ L + IDF GHALAL+R D YL++P +T Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMTVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.048e-63 Identity = 114/205 (55.61%), Postives = 159/205 (77.56%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGN----EQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPA 667 +D +YDVIVLGTG+ ECILSGLLSVDG KVLH+D+ D+YGGE++S+ L QL+++F+ N E+ + G RD+NVD+IPKF++ANG L +LIHTDVT+Y+ FK V GS+V+ +GK++KVPA ++EA+ SPLMGIFEKRR +KF ++ Y E+D TH+G+DL + T E+ K+GL ++T +FIGHA+AL +D YL +PA Sbjct: 6 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPA 210
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: RABEP_DROME (Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 50/180 (27.78%), Postives = 87/180 (48.33%), Query Frame = 2 Query: 62 NMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHL---------------------------GSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEN 520 ++ E++D++V+GTG E ++ S G VLH+D N+YYG SS ++ L R +P + L SR +++D+ P+ + A G LV++LI +++ +Y F+AVD + + G++ VP + + + + I EKR KF DY E+ Sbjct: 4 DLPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVEPHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGED 183
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: RAEP_YEAST (Rab proteins geranylgeranyltransferase component A OS=Saccharomyces cerevisiae GN=MRS6 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14 Identity = 49/166 (29.52%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 71 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLG------------------SSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYD 514 ++ DV++ GTG+ E +L+ L+ G VLH+D+NDYYG S++L + Q+ KR+ NE + SSRD+ +D+ PK + A L+ +LI + V +YL F+++ Y K+ T E + + KR KF +V +++ Sbjct: 45 DKVDVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQI-KRW-VNEVNEGSVSCYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNWE 208
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: RAEP_CANAL (Rab proteins geranylgeranyltransferase component A OS=Candida albicans GN=MRS6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12 Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 80 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWK-----------RFR-------GNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVY-NKGKVHKVPA-TDMEALKSPLMGIFEKRRARKFFIYV 502 DV+++GTGL+E IL+ LS G +VLH+D N YYG S+L + QL K +F+ G +Q + +S+DY +D+ PK + L+ +LI + V +YL F+++ V+ N KV A T + + + KR KF ++ Sbjct: 5 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQLKKWCGDVNSGKIHQFQDAQIYIPGGKQSNQY--TSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFHVFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKFL 163 The following BLAST results are available for this feature:
BLAST of CX295354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295354 ID=CX295354; Name=CX295354; organism=Citrus clementina; type=EST; length=678bpback to top |