CX295375

Overview
NameCX295375
Unique NameCX295375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.627e-29
Identity = 75/167 (44.91%), Postives = 100/167 (59.88%), Query Frame = 3
Query:  105 GKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA--IGLAPR 599
            G   S++G     K   K QVVGWPPV S+RK         +   N+A      +  +VKVSMDGAP+LRK+DL ++K Y +L+ AL K+F        G  GM + +        +   ++VP YEDKDGDWMLVGDVPW+MF++SCKRLRIMK ++A   GL P+
Sbjct:   45 GDENSSSGGGGDRKMENKNQVVGWPPVCSYRK---------KNSVNEA------SKMYVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLF--------GCYGMVEALKN------VENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFGLQPK 182          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.758e-28
Identity = 79/188 (42.02%), Postives = 98/188 (52.13%), Query Frame = 3
Query:   96 KTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQ-----------------KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVE 608
            K    SAS  G+   S P + +QVVGWPP+ S R N +                    KD+E  D          V F+KV+MDG    RKVDL  + SY+ L+  L  MF     G  G      F    +L+D    S++V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GLA R  E
Sbjct:   57 KRAADSASHAGS---SPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQ--FTKPLRLLD--GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 237          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 3.316e-27
Identity = 73/158 (46.20%), Postives = 90/158 (56.96%), Query Frame = 3
Query:  108 KSASATGATDLSKPPAK-AQVVGWPPVRSFR-KNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGS 575
            K AS     DL   PAK +QVVGWPPV S+R KN +   K +                +VKVS+DGA +LRK+DL++YK YQ+L+ AL  +F  +                    D L  S+ VP YEDKDGDWML GDVPW+MF+ SCKRLRIMK S
Sbjct:   34 KRASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERTKSS----------------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI----------------NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.656e-27
Identity = 69/163 (42.33%), Postives = 90/163 (55.21%), Query Frame = 3
Query:   99 TKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIG 587
            T+ +++  +   D S P  K+Q VGWPPV S+R+     +K+NEE            + +VKVSMDG PY+RK+DL    SY  L   L  +F    IG    +G K               +Y+  YEDKD DWMLVGDVPW MF +SCKRLRI+K S+A G
Sbjct:   49 TENENSVVSSVEDESLPVVKSQAVGWPPVCSYRR-----KKNNEEASKA--------IGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-VAKEGKK--------------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.260e-26
Identity = 81/205 (39.51%), Postives = 109/205 (53.17%), Query Frame = 3
Query:   18 RGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIM-------AVQKDNEE-----GDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSD-YVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLA 593
            R +AD       + S   +  I  I++T    A+ +G           QVVGWPP+R++R N M       A +  N E       N++      N  FVKV+MDG P  RK+DL  +K Y+ LS+ L +MF    +G+   +   D   E+ +  L +GS   V TYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G A
Sbjct:   51 RVYADDSSSSSSSSSLSRASVIAGIKRTADSMAATSG-----------QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLE--TDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.167e-26
Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  144 KPPAKAQVVGWPPVRSFRKNIMAVQKD------------NEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESK-LIDLLNGS-DYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSE 578
            K  A   VVGWPPVRSFRKN+ +                N+  D +          FVK++MDG P  RKVDL  Y SY++LS  + K+F          + + D   E K +I LL+G  ++  TYED +GD MLVGDVPW MFV S KRLR++K SE
Sbjct:   97 KRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLL---AAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.053e-25
Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 3
Query:  111 SASATGATDLSKPPAKAQ---VVGWPPVRSFRKNI-------MAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSF-------TIGNCGSQGMKDFMNESKLIDLLNGSD-YVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSE 578
            S   + A   S P  +     VVGWPP+RSFR+N+        + ++ N+E D+KA          VK++MDG P  RKVDL++Y SYQ+LS A+ ++F  F       +    G QG +D +       LL+G+  Y   YED DGD ML GD+PW +FV + KRLR+M+ SE
Sbjct:  147 SPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKR-PLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSG----LLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.012e-24
Identity = 63/168 (37.50%), Postives = 89/168 (52.98%), Query Frame = 3
Query:  114 ASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDN------------EEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG-NCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSE 578
            ++ T A+  S   A A VVGWPPVRSFR+N+ +    +            + GD  +         FVK++MDG P  RKVDL  Y  Y +LS A+ K+F       +  + G  D     +++    G +Y   YED +GD MLVGDVPW MF+ + KRLR++K S+
Sbjct:   54 SNGTNASKPSGAAAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMV---GGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.984e-24
Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 3
Query:  165 VVGWPPVRSFRKNIMAVQKDNEE---GDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCG--SQGMKDFMNESKLID-LLNGS-DYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSE 578
            VVGWPPVR+FR+N+    K + E   G   A         F+K++MDG P  RK+DL  + SY++LS A+ K+F           + G KD   E   I  LL+G+ +Y   YED +GD +LVGDVPW MFV S KRLR++K S+
Sbjct:  139 VVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.224e-23
Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 3
Query:  162 QVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 590
            Q+VGWPPV + RK +                       +VKV++DGA YLRKVDL +Y  Y +L  AL  MF          QG+   +   ++ +L    ++V TYEDKDGD MLVGDVPW MFV+SCKR+R+MK  +AIGL
Sbjct:   70 QLVGWPPVATARKTVRR--------------------KYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF----------QGI---ITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179          
The following BLAST results are available for this feature:
BLAST of CX295375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
AX22A_PHAAU4.627e-2944.91Auxin-induced protein 22A OS=Phaseolus aureus GN=A... [more]
IAA13_ARATH1.758e-2842.02Auxin-responsive protein IAA13 OS=Arabidopsis thal... [more]
IAA5_ARATH3.316e-2746.20Auxin-responsive protein IAA5 OS=Arabidopsis thali... [more]
IAA6_ARATH5.656e-2742.33Auxin-responsive protein IAA6 OS=Arabidopsis thali... [more]
IAA11_ARATH1.260e-2639.51Auxin-responsive protein IAA11 OS=Arabidopsis thal... [more]
IAA26_ARATH8.167e-2642.77Auxin-responsive protein IAA26 OS=Arabidopsis thal... [more]
IAA18_ORYSJ4.053e-2539.66Auxin-responsive protein IAA18 OS=Oryza sativa sub... [more]
IAA2_ORYSJ2.012e-2437.50Auxin-responsive protein IAA2 OS=Oryza sativa subs... [more]
IAA7_ORYSJ9.984e-2443.45Auxin-responsive protein IAA7 OS=Oryza sativa subs... [more]
IAA15_ARATH2.224e-2344.06Auxin-responsive protein IAA15 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05071E09SK PhIFruit1 Citrus clementina cDNA clone C05071E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295375 ID=CX295375; Name=CX295375; organism=Citrus clementina; type=EST; length=654bp
ACATTAATGGCATGAAGAGAGGATTTGCAGACACCGTTGTTGATTTGAAG
CTAAATCTTTCAACAAAAGAGTCAGGTGGGATTGATGTAATTCAGAAGAC
GAAGGGCAAAAGTGCTTCTGCTACTGGGGCTACAGACCTTTCAAAGCCTC
CGGCCAAGGCACAAGTTGTGGGTTGGCCACCCGTTAGATCATTCAGAAAG
AACATCATGGCCGTCCAAAAGGACAATGAAGAAGGTGATAATAAGGCTAG
CAGCAGCAGCAGCAGCAATGTAGCTTTTGTTAAAGTGAGCATGGATGGTG
CCCCATACTTGCGCAAGGTTGATTTGAAGCTATACAAAAGCTACCAAGAA
CTCTCTGATGCCCTTGGCAAAATGTTCAGCTCTTTCACCATTGGTAACTG
TGGGTCACAAGGGATGAAGGATTTTATGAATGAGAGCAAACTGATTGATC
TTTTGAATGGCTCAGATTATGTACCTACTTATGAAGACAAAGATGGAGAT
TGGATGCTTGTTGGTGATGTACCATGGGATATGTTTGTTGATTCATGCAA
ACGCTTAAGAATAATGAAAGGATCCGAGGCCATTGGACTTGCACCAAGGG
CAGTTGAGAAGTGCAAGAACAGAAGCTGAAGATTTGATTATGATCAGCAA
CTTT
back to top