CX295407

Overview
NameCX295407
Unique NameCX295407
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: CYAA_SACKL (Adenylate cyclase OS=Saccharomyces kluyveri GN=CYR1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.156e-11
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  179 NLKILDVSGNKLSALP-DSISHCRSLVELDASFNRLAYLPTNI--GHELVNLQKLLVPLNKIRFLPTSIGEMASLHHLDAHFNELHGLPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQIHALPNTFGRLDQLV*LNLEEN 631
            +++ LDVS N    LP D I     L  L     R +  P N+   ++LV+L    +  N I+ +P SI ++ +L  ++   N L  LP    KL NL++L++SSN       PE     TNL ++DLS N+IH+LP +  +L +L  +NL  N
Sbjct:  634 DIESLDVSNNANIFLPLDFIESAIKLSSLRMVNIRASKFPANVTDAYKLVSLD---LERNFIKKVPDSIFKLNNLTIVNLQCNNLERLPPGFSKLKNLQLLDISSN--KFVNYPEVINSCTNLLQIDLSYNKIHSLPVSINQLVKLAKMNLFNN 782          

HSP 2 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 59/243 (24.28%), Postives = 104/243 (42.80%), Query Frame = 2
Query:   53 MSLSNNHLEVIPDSIAGXXXXXXXXXXXXXXXXXPDSIGLLDNLKILDVSGNKLSALPDSISHCRSLVELDASFNRLAYLPTNIGHELVNLQKLLVPLNKIRFLPTSIGEMASLHHL-------------DAHFNELHGLPATIGK-------LTNLEILNVSSN-----------FTDMKEL-----------PETFGELTNLKELDLSNNQIHALPNTFGRLDQLV*LNLEENPMVIPPVE 655
            + L  N ++ +PDSI                   P     L NL++LD+S NK    P+ I+ C +L+++D S+N++  LP +I ++LV L K+ +  N++    TS+G+++ + +L             + H   L  L  T  +       LT L  L +  N             +M  L            E   +L  L++L+L+ N +  LP    +L +L+ L++  N +   P E
Sbjct:  685 LDLERNFIKKVPDSIFKLNNLTIVNLQCNNLERLPPGFSKLKNLQLLDISSNKFVNYPEVINSCTNLLQIDLSYNKIHSLPVSI-NQLVKLAKMNLFNNRL----TSVGDLSQMKNLRTLNLRCNRVTSIECHAPNLQNLFLTDNRISTFDDDLTRLRTLELQQNPITSMVCGGNYMANMTSLSLNKAKLSSFSAELLSKLPRLEKLELNENNLTQLPPEINKLTRLIYLSVARNKLESIPDE 922          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11
Identity = 56/162 (34.57%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  155 PDSIGLLDNLKILDVSGNKLSA-LPDSISHCRSLVELDASFNRL-AYLPTNIGHELVNLQKLLVPLNKIRF-LPTSIGEMASLHHLDAHFNELHGLPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQIHALPNTFGRLDQLV*LNLEEN 631
            P  +G L  L+ L++S N L   LP  +S+C  L ELDAS N L   +P+ +G  L  L KL +  N     +PTS+ +   L +L    N L G    +G L  L  LN+SSN  +  +LP   G+L  L+ELD+S+N +         +  L  +N+  N
Sbjct:  540 PPELGSLVKLEHLNLSHNILKGILPSELSNCHKLSELDASHNLLNGSIPSTLG-SLTELTKLSLGENSFSGGIPTSLFQSNKLLNLQLGGNLLAGDIPPVGALQALRSLNLSSNKLN-GQLPIDLGKLKMLEELDVSHNNLSGTLRVLSTIQSLTFINISHN 699          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: LRC69_MOUSE (Leucine-rich repeat-containing protein 69 OS=Mus musculus GN=Lrrc69 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11
Identity = 55/211 (26.07%), Postives = 95/211 (45.02%), Query Frame = 2
Query:   14 LPEAFGRIAGLRLMSLSNNHLEVIPDSIAGXXXXXXXXXXXXXXXXXPDSIGLLDNLKILDVSGNKLSAL-PDSISHCRSLVELDASFNRLAYLPTNIGHELVNLQKLLVPLNKIRFLPTSIGEMASLHHLDAHFNELHGLPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQIHALPNTFGRLDQLV*LNLEENPMVI 643
            +P    ++  L+ + L NN +  +   +                   P+ I  L +LK L + GN++  + P   +    L+ L+ + NRL  LP  IG  L +L  L +  N +  +P  +  +  L  L  ++N++  +P  I  L NL+ L +  N  +++ELPE    L  L+ LD++ N I   P  F  L +L     E NP+ +
Sbjct:   29 MPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGNNHLQEVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSLPQEIGR-LRSLTYLSLNRNNLTVIPKELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQLFLVRN--NIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNL-RLTEFYCEGNPLFL 235          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: CPN2_MOUSE (Carboxypeptidase N subunit 2 OS=Mus musculus GN=Cpn2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11
Identity = 63/214 (29.44%), Postives = 99/214 (46.26%), Query Frame = 2
Query:   23 AFGRIAGLRLMSLSNNHLEVIPDSIAGXXXXXXXXXXXXXXXXXPDSIGLLDNLKILDVSGNKLSAL-PDSISHCRSLVELDASFNRLAYLPTNIGHELVNLQKLLVPLNKIRFLPTSI-GEMASLHHLDAHFNELHGLPATIGKLTNLE-ILNVSSNFTDMKELPE-TFGELTNLKELDLSNNQIHAL-PNTFGRLDQLV*LNLEENPMVIPP 649
            AF  + GL+++ LSNN L  +P+                       ++G L +L+ L + GN ++ L P   S   SL  L    N + +LP ++   L NL  L +  N +R LP  +      L HL   +N+L  +P   G  TNL  +++++ +   + +LPE  F  L  L +L L +N + AL P  F  L +L  LNL  N +   P
Sbjct:  188 AFQSLTGLQMLKLSNNMLARLPEG----------------------ALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPE--GAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLP 377          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: PIDD_HUMAN (Leucine-rich repeat and death domain-containing protein OS=Homo sapiens GN=LRDD PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.972e-11
Identity = 51/166 (30.72%), Postives = 79/166 (47.59%), Query Frame = 2
Query:   14 LPEAFGRIAGLRLMSLSNNHLEVIPDSIAGXXXXXXXXXXXXXXXXXPDSIGLLDNLKILDVSGNKLSALPDSISHCRSLVELDASFNRLAYLPTNIGHELVNLQKLLVPLNKIRFLPTSIGEMASLHHLDAHFNELHGLPATIGKLTNLEILNVSSNFTDMKELP 511
            LP     +A L  + LS N LE +P  +                   P+++G L  L  L V+ N+L  LP ++    +L  LD S N L  LP  IG  L +L +L +  N+++ LP S+  + SL  L  H N L  +PA + +L  L  L++  N   +++LP
Sbjct:  117 LPAGLSGLAHLAHLDLSFNSLETLPACVLQMRGLGALLLSHNCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPPEIGG-LGSLLELNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPLLTRLDLRDN--QLRDLP 279          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: MPL3_DICDI (MAP kinase phosphatase with leucine-rich repeats protein 3 OS=Dictyostelium discoideum GN=mpl3 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.972e-11
Identity = 49/153 (32.03%), Postives = 84/153 (54.90%), Query Frame = 2
Query:  191 LDVSGNKLSALPDSISHCRSLVELDASFNRLAYLPTNIGHELVNLQKLLVPLNKIRFLPTSIGEMASLHHLDAHFNELHGLPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQIHALPNTFGRLDQLV*LNLEENPMVIPP 649
            L +S N    +PD +   +SL  ++ + N+L+ L T++  EL +L  L++  N I  +P  I ++ +L +L    N L  LP ++  L+ L  L++S N   +K LP  F +L NL+ + LS NQI +LP +  +L  LV  ++  N ++  P
Sbjct:  374 LTLSTNFFQIIPD-LQLVKSLTTVNLTRNKLSKLQTSVFIELPSLTSLILDRNFISSIPDDIDQIKNLKYLSIKHNALEYLPNSLSNLSQLISLDLSQN--KLKTLPPNFDDLINLRMVWLSYNQITSLP-SMRKLVNLVTFDISSNKLLSLP 522          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 63/212 (29.72%), Postives = 97/212 (45.75%), Query Frame = 2
Query:   14 LPEAFGRIAGLRLMSLSNNHLE-VIPDSIAGXXXXXXXXXXXXXXXXX--PDSIGLLDNLKILDVSG-NKLSALPDSISHCRSLVELDASFNRLAYLPTNIGHELVNLQKLLVPLNKIR-FLPTSIGEMASLHHLDAHFNELHGLPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQI-HALPNTFGRLDQLV*LNLEEN 631
            +P +FG    L  ++L+ N L   IP S+                     P  +G L  L++L ++G N +  +P S+S   SLV LD +FN+L     +   +L  ++++ +  N     LP S+G M +L   DA  N+L G       L NLE LN+  N  +   LPE+      L EL L NN++   LP+  G    L  ++L  N
Sbjct:  155 IPSSFGEFRKLESLNLAGNFLSGTIPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLAGCNLVGPIPPSLSRLTSLVNLDLTFNQLTGSIPSWITQLKTVEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLTGKIPDNLNLLNLESLNLFENMLE-GPLPESITRSKTLSELKLFNNRLTGVLPSQLGANSPLQYVDLSYN 365          

HSP 2 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 62/187 (33.16%), Postives = 93/187 (49.73%), Query Frame = 2
Query:  173 LDNLKILDVSGNKLS-ALPDSISHCRSLVELDASFN-------------------RLAY---LPTNIGHELVNLQKL----LVPLNKIRFLPTSIGEMASLHHLDAHFNELHG-LPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQIHA-LPNTFGRLDQLV*LNLEENPMVIP 646
            L NLK L++SGN LS  +P S    R L  L+ + N                   +LAY    P+ I  +L NL +L    L   N +  +P S+  + SL +LD  FN+L G +P+ I +L  +E + + +N +   ELPE+ G +T LK  D S N++   +P+    L+ L  LNL EN +  P
Sbjct:  138 LPNLKFLEISGNNLSDTIPSSFGEFRKLESLNLAGNFLSGTIPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLAGCNLVGPIPPSLSRLTSLVNLDLTFNQLTGSIPSWITQLKTVEQIELFNN-SFSGELPESMGNMTTLKRFDASMNKLTGKIPDNLNLLN-LESLNLFENMLEGP 322          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: LRRC2_MOUSE (Leucine-rich repeat-containing protein 2 OS=Mus musculus GN=Lrrc2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 51/201 (25.37%), Postives = 93/201 (46.27%), Query Frame = 2
Query:   50 LMSLSNNHLEVIPDSIAGXXXXXXXXXXXXXXXXXPDSIGLLDNLKILDVSGNKLSALPDSISHCRSLVELDASFNRLAYLPTNIGHELVNLQKLLVPLN-KIRFLPTSIGEMASLHHLDAHFNELHGLPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQIHALPNTFGRLDQLV*LNLEENPMVIPP 649
            +  LS    + +PDS+                   P  I L   +KILD+  N+++ LP  I   ++L EL+ SFN L  +P  +G +  +L++L    N  +  LP  +  +  +  +D   N+   +P  + ++  L+ L++SSN  ++ +LP+    L  L+   L  N++  LP     L +L  L +  + +V  P
Sbjct:  102 VFELSGTQWKELPDSLKEQTHLKEWYIHSTLIQIIPTYIELFQAMKILDLPKNQITCLPAEIGRLKNLKELNVSFNHLKSIPPELG-DCEHLERLDCSGNLDLMDLPFELSNLKQVTFVDISANKFSSVPICVLRMCRLQWLDISSN--NLSDLPQDIDRLEELQGFLLYKNKLTYLPQAMLNLKKLTLLVVSGDHLVEVP 299          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.392e-11
Identity = 57/191 (29.84%), Postives = 92/191 (48.17%), Query Frame = 2
Query:   14 LPEAFGRIAGLRLMSLSNNHLE-VIPDSIAGXXXXXXXXXXXXXXXXX-PDSIGLLDNLKILDVSGNKLSA-LPDSISHCRSLVELDASFNRLA-YLPTNIGHELVNLQKLLVPLNKIR-FLPTSIGEMASLHHLDAHFNELHG-LPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQI 568
            +P +FG++  L+ + LS N +   IP+ +                    P  +  L +L +     NKL+  +P S+S CR L  +D S+N L+  +P  I   L NL KLL+  N +  F+P  IG   +L+ L  + N L G +P+ IG L NL  +++S N   +  +P       +L+ LDL  N +
Sbjct:  326 IPRSFGKLENLQELQLSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIPSLMSNLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSGSIPKEI-FGLRNLTKLLLLSNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRL-VGSIPPAISGCESLEFLDLHTNSL 514          

HSP 2 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 72/233 (30.90%), Postives = 101/233 (43.35%), Query Frame = 2
Query:   20 EAFGRIAGLRLMSLSNNHLEVIPDSIAGXXXXXXXXXXXXXXXXX-PDSIGLLDNLKILDVSGNKL-SALPDSISHCRSLVELDASFNRLA------------------------YLPTNIGHELVNLQKLLVPLNKIRF-LPTSIGEMASLHHLDAHFNELHG-LPATIGKLTNLEI-LNVSSNFTDMKELPETFGELTNLKELDLSNNQIHALPNTFGRLDQLV*LNLEEN 631
            E FG     +L+ LSN+    IP  I                    P  IG L NL  +D+S N+L  ++P +IS C SL  LD   N L+                         LP  IG  L  L KL +  N++   +P  I    SL  L+   N+  G +P  +G++ +L I LN+S N   + E+P  F +L NL  LD+S+NQ+    N    L  LV LN+  N
Sbjct:  425 EIFGLRNLTKLLLLSNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFLDLHTNSLSGSLLGTTLPKSLKFIDFSDNALSSTLPPGIGL-LTELTKLNLAKNRLSGEIPREISTCRSLQLLNLGENDFSGEIPDELGQIPSLAISLNLSCN-RFVGEIPSRFSDLKNLGVLDVSHNQLTGNLNVLTDLQNLVSLNISYN 655          
BLAST of CX295407 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.392e-11
Identity = 67/220 (30.45%), Postives = 104/220 (47.27%), Query Frame = 2
Query:   20 EAFGRIAGLRLMSLSNNHLE-VIPDSIAGXXXXXXXXXXXXXXXXXP---DSIGLLDNLKILDVSGNKLS-ALPDSISHCRSLVELDASFNRLA-YLPTNIGHELVNLQKLLVPLNKIRF--------LPTSIGEMASLHHLDAHFNELHG-LPATIGKLTNLEILNVSSNFTDMKELPETFGELTNLKELDLSNNQIHA-LPNTFGRLDQLV*LNLEEN 631
            + F   + LR +SLS+NHLE  IP ++                   P     I  L+ L+ LD+S N LS ++P  I    +L EL    N+ +  LP++IG        L   LN++          LP ++ ++ SL+H D   N L G  P  IG +T L  L+ SSN    K LP +   L +LK+L+LS N++   +P +     +L+ + L+ N
Sbjct:  167 DLFNNCSSLRYLSLSHNHLEGQIPSTLFRCSVLNSLNLSRNRFSGNPSFVSGIWRLERLRALDLSSNSLSGSIPLGILSLHNLKELQLQRNQFSGALPSDIG--------LCPHLNRVDLSSNHFSGELPRTLQKLKSLNHFDVSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGK-LPSSISNLRSLKDLNLSENKLSGEVPESLESCKELMIVQLKGN 377          
The following BLAST results are available for this feature:
BLAST of CX295407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CYAA_SACKL1.156e-1134.42Adenylate cyclase OS=Saccharomyces kluyveri GN=CYR... [more]
RPK1_IPONI1.510e-1134.57Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
LRC69_MOUSE1.510e-1126.07Leucine-rich repeat-containing protein 69 OS=Mus m... [more]
CPN2_MOUSE1.510e-1129.44Carboxypeptidase N subunit 2 OS=Mus musculus GN=Cp... [more]
PIDD_HUMAN1.972e-1130.72Leucine-rich repeat and death domain-containing pr... [more]
MPL3_DICDI1.972e-1132.03MAP kinase phosphatase with leucine-rich repeats p... [more]
RLK5_ARATH2.575e-1129.72Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
LRRC2_MOUSE2.575e-1125.37Leucine-rich repeat-containing protein 2 OS=Mus mu... [more]
Y4265_ARATH4.392e-1129.84Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH4.392e-1130.45Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionC05071H06SK PhIFruit1 Citrus clementina cDNA clone C05071H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295407 ID=CX295407; Name=CX295407; organism=Citrus clementina; type=EST; length=657bp
GGGACTGCGCTTCCTGCCCGAGGCTTTTGGCAGGATCGCTGGTTTGAGGC
TCATGAGCTTGTCTAACAATCACCTGGAGGTAATTCCTGACTCAATAGCT
GGATTAGTGAATCTGGAGGAACTTAATCTGGCTTCAAATCTTCTAGAGAC
GCTGCCTGACTCTATTGGGTTGTTGGATAATCTGAAGATCCTGGATGTCT
CGGGCAACAAATTAAGTGCCTTACCTGATTCCATCTCTCATTGCAGGTCA
TTGGTGGAGCTGGATGCAAGCTTCAATCGCCTAGCTTATTTGCCAACTAA
TATTGGACATGAGTTGGTGAATCTTCAGAAGCTTCTGGTCCCTTTGAACA
AGATTCGTTTCCTCCCCACTTCGATAGGTGAAATGGCGTCTTTGCATCAT
CTGGATGCTCACTTTAATGAGCTCCATGGCCTTCCAGCAACAATTGGGAA
GTTGACGAACCTTGAGATCCTCAATGTATCCAGTAATTTTACCGATATGA
AAGAACTTCCAGAAACCTTTGGTGAACTGACAAACCTCAAAGAACTTGAT
CTCAGCAACAACCAGATTCATGCTCTTCCGAATACATTCGGTCGGCTTGA
CCAATTGGTTTAGCTCAACCTGGAAGAAAATCCTATGGTTATCCCACCTG
TGGAGGT
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