CX295421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.686e-41 Identity = 77/135 (57.04%), Postives = 102/135 (75.56%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +E+DA+G KR+D+ G+RE+QRTMLELLNQLDGF VKVI ATNR++ LDPALLR GR+DRKIEFP+P+ + R RI QIH+ +M ++ DVN EE D+F+GA KA+C EAG++ALR ++TH D+ Sbjct: 251 DELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDY 385
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.140e-40 Identity = 76/135 (56.30%), Postives = 105/135 (77.78%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +E+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF S VKVI ATNR+++LDPALLR GR+DRK+EFPLP+ + R I +IH+ +M + DD+N EE + DE++GA +K++C EAG++ALR+ K+ H F Sbjct: 285 DELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHF 419
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40 Identity = 77/135 (57.04%), Postives = 103/135 (76.30%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +EIDA+G KR D+ G+RE+QRTMLELLNQLDGF S +VK+I ATNR++ LDPALLR GR+DRKIEFPLP+ R+RI QIH +M++ DDVN +E + + F+GA KA+C EAG+ ALR+ + +++ DF Sbjct: 248 DEIDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDF 382
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.541e-40 Identity = 76/135 (56.30%), Postives = 107/135 (79.26%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +E+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ TS+M L+D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF Sbjct: 255 DEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 389
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.318e-40 Identity = 79/135 (58.52%), Postives = 105/135 (77.78%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +EIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R IF TS+M L+++V+LE++V D+ SGADI +IC G+LA+RE V DF Sbjct: 265 DEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.333e-40 Identity = 75/141 (53.19%), Postives = 106/141 (75.18%), Query Frame = 3 Query: 3 SCRIRHEEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +C + +E+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV++ATNR ++LDPALLRPGR+DRK+EF LPD+++R +IF+IHT M D+ E +GADI+++CTEAG+ A+R RR VT DF Sbjct: 261 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 401
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.333e-40 Identity = 75/141 (53.19%), Postives = 106/141 (75.18%), Query Frame = 3 Query: 3 SCRIRHEEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +C + +E+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV++ATNR ++LDPALLRPGR+DRK+EF LPD+++R +IF+IHT M D+ E +GADI+++CTEAG+ A+R RR VT DF Sbjct: 262 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.660e-40 Identity = 80/135 (59.26%), Postives = 104/135 (77.04%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +E+DA+ +R ++ + G+RE+QRTM++LL +LDGFD RGDVKVI ATNRI+ LDPA+LRPGR DR IE PLP + R +IF+IHT +M LA+DV+ +E + SGADIKAICTEAG+ A+RE R KVT DF Sbjct: 241 DELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDF 375
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.392e-40 Identity = 75/135 (55.56%), Postives = 106/135 (78.52%), Query Frame = 3 Query: 21 EEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +E+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ T++M L D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF Sbjct: 260 DEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDF 394
BLAST of CX295421 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.654e-40 Identity = 75/141 (53.19%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 3 SCRIRHEEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 425 +C + +E+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV++ATNR ++LDPALLRPGR+DRK+EF LPD++ R +IF+IHT M D+ E +GADI+++CTEAG+ A+R RR VT DF Sbjct: 262 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402 The following BLAST results are available for this feature:
BLAST of CX295421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 295
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295421 ID=CX295421; Name=CX295421; organism=Citrus clementina; type=EST; length=645bpback to top |