CX295424

Overview
NameCX295424
Unique NameCX295424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM2_SOYBN (Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 44/136 (32.35%), Postives = 72/136 (52.94%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T   +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
[Close]
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T + +    E F  FD D DG IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL +  + M+       LK AF   + D +  ++ AEL  V+ NLG  L+  +  E+I   D DGDG +++E+
Sbjct:    6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
The following BLAST results are available for this feature:
BLAST of CX295424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
CALM_HELAN5.198e-1632.35Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM2_SOYBN5.198e-1632.35Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2[more]
CALM1_ORYSJ5.198e-1632.35Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI5.198e-1632.35Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM_SPIOL6.788e-1632.35Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_LILLO6.788e-1632.35Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_EUPCH6.788e-1632.35Calmodulin OS=Euphorbia characias PE=2 SV=4[more]
CALM_BRYDI6.788e-1632.35Calmodulin OS=Bryonia dioica PE=2 SV=2[more]
CALM7_ARATH6.788e-1632.35Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ... [more]
CALM3_PETHY6.788e-1632.35Calmodulin-related protein OS=Petunia hybrida GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05072A11SK PhIFruit1 Citrus clementina cDNA clone C05072A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295424 ID=CX295424; Name=CX295424; organism=Citrus clementina; type=EST; length=706bp
GAGGAAAGGGCCGGGTAGTGTGATAGAGTCGCGATCGGGATAATCTTTTG
GGTGCAACTTTGAGGATAAGGATAATAATTGCAAGCATAAGAATCGACGT
CTACTTTAATTATTCTACTTTAATTTTTGTCGACTCAAAGGAACAACAAA
AGAATAATGGCCGCCCCCTCATCTCCACTATTTATACATAGAATGAACCA
AATCCTAACAAAAGTGACGTTGTGCATTAATATTAGTTGTTGTGATTGCA
GAAGTTGATCCATGGCTCAATCCAGGCCTCTCTCCGAGGAAACCGAGACA
TTGAACCATGTCTTAAGTCTAGTGGAGACTTTCAGAGCCTTTGATTCGGA
CAACGATGGGTCGATCACTGGTGCTGAGCTCTCTGGAATATTCAATTCAG
TTGGTTACAGGGCTAGCGAGGAAGATGTCAGGGAAATGATGCGGCAAGGT
GACGCGAACAACGACGGATTGCTGAGCTTGGAGGAGTTCTTGGAGATGAA
CACCAAAGACATGGAGCTTGGAAGCCTTGGGAATTTGCTCAAGGCAGCTT
TTGAATCTCTGAATCTTGATGGTGATGATATCTTAACTGGAGCAGAGCTG
CATGAAGTTATTGAAAATTTAGGAGTTGGGTTGTCATTAGCTGATTGCCA
GGAGATTATTGCTTCCATGGATGGAGACGGTGATGGTGCTGTTAGCTTTG
AGGACC
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