CX295448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.027e-68 Identity = 126/217 (58.06%), Postives = 150/217 (69.12%), Query Frame = 2 Query: 77 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYG 706 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT ETTGGW AP G YAWGYC++R+ R S YC PC QYYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI W PS+ + A RLPGYG Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRE--RNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYG 264
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 4.517e-68 Identity = 123/216 (56.94%), Postives = 152/216 (70.37%), Query Frame = 2 Query: 77 CGSGVVCGERDTGHGTD---GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 CGSG C + G G GG+LG IS MF+ +L +RN+ C + FY+Y+AFI AA++FP FG SG+ RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VII W PS+ + A RLPG+G+ Sbjct: 57 CGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPG-DYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGV 270
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.716e-67 Identity = 124/204 (60.78%), Postives = 149/204 (73.04%), Query Frame = 2 Query: 110 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGG--WPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT ETTGG W AP G YAWGYCY R+++ P+S YC PC QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII W PS+ + AGR+PGYG+ Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGV 266
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 3.824e-67 Identity = 121/205 (59.02%), Postives = 144/205 (70.24%), Query Frame = 2 Query: 98 GERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVS-RPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT ETTGGWPDAP G YAWGYCY+++++ +P D Y C QY GRGPIQL+WN NY CG+ L + LL P+L+ TDPV+SFK+AIWFWM Q PKPSCH VI W PSA + AGR+PGYG+ Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNY-QCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGV 279
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.824e-67 Identity = 122/214 (57.01%), Postives = 151/214 (70.56%), Query Frame = 2 Query: 77 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 CG G C + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS ++ A R+PG+G+ Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGV 260
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.898e-66 Identity = 119/199 (59.80%), Postives = 145/199 (72.86%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT ETTGGW AP G YAWGYCY+R+ P S YC + P PGQ YYGRGPIQ+++N NY CG A+G +LLNNPDL+AT+ V+SFKSAIWFWMTAQ PKPSCH+VI W PSA + A RLPGYG+ Sbjct: 79 GPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGV 276
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 2.478e-66 Identity = 123/204 (60.29%), Postives = 147/204 (72.06%), Query Frame = 2 Query: 110 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGG--WPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT ETTGG W AP G YAWGYCY R+++ P+S YC PC QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII W PS+ + AGR GYG+ Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGV 244
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 5.521e-66 Identity = 120/214 (56.07%), Postives = 149/214 (69.63%), Query Frame = 2 Query: 77 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ Sbjct: 53 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGV 264
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.606e-65 Identity = 117/212 (55.19%), Postives = 149/212 (70.28%), Query Frame = 2 Query: 80 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 G G G G G GG + ++S+E+FE LL +RND CPARGFYTYDA + AA AFP F +G++ RKRE+AAF QT ETTGGW AP G Y+WGYC+ ++ AS YC PC +Y+GRGPIQL++N NY GEA+G DLLNNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI +W PS+ + AGR+PGYG+ Sbjct: 67 GGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGV 277
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.098e-65 Identity = 120/214 (56.07%), Postives = 148/214 (69.16%), Query Frame = 2 Query: 77 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGV 260 The following BLAST results are available for this feature:
BLAST of CX295448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295448 ID=CX295448; Name=CX295448; organism=Citrus clementina; type=EST; length=709bpback to top |