CX295448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.579e-65 Identity = 116/200 (58.00%), Postives = 144/200 (72.00%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD ++SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ Sbjct: 60 GGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPG-DYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGV 258
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.957e-64 Identity = 122/223 (54.71%), Postives = 151/223 (67.71%), Query Frame = 2 Query: 77 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN RKRE+AAF QT ETTGGWP AP G ++WGYC+ +Q P SDYC PC +YYGRGPIQL++N NY G A+GVDLL+NPDL+ATD +SFK+A+WFWMT Q KPS H+VI W PS ++ AGR PGYG+ Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCF-KQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGV 280
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.462e-63 Identity = 107/196 (54.59%), Postives = 141/196 (71.94%), Query Frame = 2 Query: 122 TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F FG +G++ +K+E+AAF AQT ETTGGWP AP G YAWGYC++ + + + PC +YYGRGPIQLT N NY G+A+ DL+NNPDLL+T+P +SFK+AIWFWMT Q KPS H+VI W PSA +S+AGR+PGYG+ Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGV 270
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.662e-62 Identity = 115/218 (52.75%), Postives = 143/218 (65.60%), Query Frame = 2 Query: 62 GSAQNCGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRY--CPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYG 706 G C G CG T + GG + IIS +F+ +L +RND C A+GFYTYDAF+ AA A+P F +G+ KRE+AAF AQT ETTGGWP AP G Y+WGYC+ + + A YC PC +YYGRGPIQ+T+N NY G+A+G DLLNNPDL+A+D +SFK+A WFWMT Q PKPSCH VI +W PSA + AGR+PGYG Sbjct: 52 GCQSQCSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYG 267
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.836e-62 Identity = 113/199 (56.78%), Postives = 139/199 (69.85%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ +KRE+AAF AQT ETTGGW AP G +AWGYC+ +Q +SDYC PC +YYGRGPIQL+ N NY G A+GVDLL NPDL+ATD + FK+AIWFWMTAQPPKPS H VI +W PS + AGR+PG+G+ Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGV 216
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 238.039 bits (606), Expect = 3.703e-62 Identity = 119/228 (52.19%), Postives = 147/228 (64.47%), Query Frame = 2 Query: 62 GSAQNCGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 GS CG G C + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF FG +G RKRE+AAF AQT ETTGGW AP G +AWGYC+ +Q S+YC PC YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS + AGR+PG+G+ Sbjct: 44 GSTPYCGDG--CQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGV 268
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.837e-62 Identity = 112/196 (57.14%), Postives = 138/196 (70.41%), Query Frame = 2 Query: 128 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ RKRE+AAF AQT ETTGGW AP G +AWGYC+ +Q S+YC PC YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS + AGR+PG+G+ Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGV 271
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.317e-62 Identity = 113/199 (56.78%), Postives = 138/199 (69.35%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ RKR++AAF AQT ETTGGW AP G +AWGYC+ +Q A+DYC PC +YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS + AGR PG+G+ Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGV 216
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.401e-61 Identity = 108/219 (49.32%), Postives = 143/219 (65.30%), Query Frame = 2 Query: 62 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVS-RPASDYCYR--YCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 G C G G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF AQT ETTGGW AP G Y+WGYC+ + + SDYC + PC +YYGRGPIQ+++N NY G+A+G +LL+NPDL+A+D +SFK+A WFWMT Q PKPSCH V+ +W P+ + AGR+PGYG+ Sbjct: 54 GCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGV 272
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60 Identity = 107/193 (55.44%), Postives = 137/193 (70.98%), Query Frame = 2 Query: 137 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT ETTGGW AP G Y+WGYCY R+ P DYC + PC +Y+GRGPIQ+++N NY G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS +S GR+PG+G+ Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPG-DYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGV 196 The following BLAST results are available for this feature:
BLAST of CX295448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295448 ID=CX295448; Name=CX295448; organism=Citrus clementina; type=EST; length=709bpback to top |