CX295448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 7.722e-60 Identity = 112/219 (51.14%), Postives = 140/219 (63.93%), Query Frame = 2 Query: 65 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPAS-DYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 SA CG G G+ G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + KRE+AAF AQT ETTGGW AP G YAWGYC+ + A DYC + PC +YYGRGPIQL++N NY G+A+G DLL +PDL+A+D +SF +A WFWMT Q PKPSCH V +W PSA + AGR+PGYG+ Sbjct: 61 SAAGCGGG----GPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGV 275
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.934e-59 Identity = 105/191 (54.97%), Postives = 136/191 (71.20%), Query Frame = 2 Query: 137 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT ETTGGW AP G +AWGYC + +++ P YYGRGPIQLT NY G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS + ++GRLPGYG+ Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEIT-------------PSDPPYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGM 203
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57 Identity = 108/199 (54.27%), Postives = 139/199 (69.85%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC++RQ+ + SD +YYGRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W PS ++ A R+PGYG+ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQ--SD------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGV 201
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.325e-56 Identity = 105/197 (53.30%), Postives = 139/197 (70.56%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG A G +A GYC++R+ ++ S + YGRGPIQLT NY G+A+G DL+NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA +++A R PGYG+ Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMGSGF-------------YGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGV 195
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.325e-56 Identity = 106/199 (53.27%), Postives = 138/199 (69.35%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC+++Q+ + SD +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W PS ++ A R+PGYG+ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQ--SD------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGV 201
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.666e-54 Identity = 104/212 (49.06%), Postives = 140/212 (66.04%), Query Frame = 2 Query: 77 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 C + + +G G +G +I++ +F +LP R++ +CPARGFYTYDAFI AA +FPAFG SG + +RE+AAFF QT ETTGG + ++ WGYC+ ++++ S YYGRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA ++ AGR+PGYG+ Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSP------------PYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGV 210
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.080e-53 Identity = 103/197 (52.28%), Postives = 134/197 (68.02%), Query Frame = 2 Query: 119 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG +P G YA GYC++R+ ++ + Y YGRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W PSA +++A R+PGYG+ Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQMGNGY-------------YGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGV 202
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.143e-53 Identity = 102/191 (53.40%), Postives = 131/191 (68.59%), Query Frame = 2 Query: 137 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT ETTGG A + GYC++RQ + SD +YYGRGPIQLT NY + G A+G +L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA + A R+PGYG+ Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQ--SD------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGV 201
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.037e-52 Identity = 102/210 (48.57%), Postives = 124/210 (59.05%), Query Frame = 2 Query: 80 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT ET G WP A G +Y WGYC++ N NY CG+ L + LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA +S AGR+PGYG+ Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM---------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGV 242
BLAST of CX295448 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.926e-52 Identity = 102/191 (53.40%), Postives = 129/191 (67.54%), Query Frame = 2 Query: 137 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIESNAGRLPGYGL 709 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT ETTGG A + GYC++RQ + SD +YYGRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA + +A R PG G+ Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQ--SD------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGV 201 The following BLAST results are available for this feature:
BLAST of CX295448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295448 ID=CX295448; Name=CX295448; organism=Citrus clementina; type=EST; length=709bpback to top |