CX295449

Overview
NameCX295449
Unique NameCX295449
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.624e-37
Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKG-DAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFYK 393
            VI  AP  P +EHV GDMF SVP+G DAI +KWILHDW DEHC +LLKNCY ++PE GKV+VVE +LPE  + +   +   H+D++M+  NPGGKER + EF  LA  AGF+G +   +  N W +EF K
Sbjct:  239 VISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37
Identity = 70/129 (54.26%), Postives = 88/129 (68.22%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFYK 393
            VI  AP  P + HV GDMF SVP GDAI +KWILHDW D HC  LLKNCY ++PE+GKVIVVE +LP     + +++   H+D++M+  NPGGKER + EF  LA GAGFSG +   +  N W +EF K
Sbjct:  236 VISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.137e-36
Identity = 68/129 (52.71%), Postives = 89/129 (68.99%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFYK 393
            VI  AP  P ++HV GDMF+SVP GDAI +KWILHDW D HC  LLKNCY ++PE+GKVI+VE +LP       +++   H+D++M+  NPGG+ER + EF  LA GAGFSG +   +  N W +EF K
Sbjct:  234 VISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.435e-33
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFYK 393
            VI  AP +P +EHV G+MF+S+P+ DAIF+KW+LHDW DEHC+K+L  CY+S+ + GK+I+VE ++P +P  ++ES     +D   +  N GGKER+K +F  LA+  GFS +       + WVME YK
Sbjct:  236 VIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.872e-32
Identity = 67/129 (51.94%), Postives = 89/129 (68.99%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFYK 393
            VI  AP +P +EHV GDMF+ VP    I LKW+LHDWDD+  +K+LKNC+K++PE+G VIV+E +LP+V   + ES +    D+LMM  NPGGKERT  EF  LA  AGF+  +F  ++    VMEF+K
Sbjct:  250 VIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERT 297
            VIE AP +P +EHV GDMF ++P GDA+F+KWI HDW DEHC KLLKNCY ++P +G+VIV E +LP  P+ S+ +K   H+D +M+T   GGKERT
Sbjct:  217 VIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.093e-27
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGN-FWVMEFYK 393
            VIE+AP    IEHV GDMF SVP+GDA+ LK + H+W DE C++ L NC+K++  +GKVI+VE +LPE PNTS ESK  S +D LM     GG+ERT+ ++  L+  +GFS  +      N   VMEFYK
Sbjct:  244 VIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-20
Identity = 55/129 (42.64%), Postives = 82/129 (63.57%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVP-EDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFY 390
            VI  +P +  +  VAGDMF+ +PK DAI +K ILHDWDD+ C+++LK C ++VP + GKVI+V+++L  V +    +K    +D+ MM  N GGKERT+ E+  L   AG+ G +   +T    V+E Y
Sbjct:  219 VIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMML-NTGGKERTEEEWKKLIHDAGYKGHKITQITAVQSVIEAY 345          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.066e-19
Identity = 49/131 (37.40%), Postives = 78/131 (59.54%), Query Frame = 1
Query:    7 VIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVP---EDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFY 390
            V+  AP H  ++ +AGDMF+S+P  DA+ LK +LHDWD + C+K+LKNC K++P     GKVI++ +++   P+     +  +  DV +M  N  G ER + E+  + + AG+S  R   V G   ++E Y
Sbjct:  235 VVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFIN--GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVY 363          
BLAST of CX295449 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.066e-19
Identity = 53/121 (43.80%), Postives = 76/121 (62.81%), Query Frame = 1
Query:   31 PHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPED-GKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFDLVTGNFWVMEFY 390
            P+IE + GDMF+SVP   AI LK ILHDW+DE  +K+LK C  +VP+D GKVI+V++ L E  +  + S +   +D+ M+  N GGKERTK  +  +   AGFSG +   +     V+E +
Sbjct:  231 PNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDHEL-SSTRLILDIDMLV-NTGGKERTKEVWEKIVKSAGFSGCKIRHIAAIQSVIEVF 349          
The following BLAST results are available for this feature:
BLAST of CX295449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OMT1_ORYSJ5.624e-3753.85Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_MAIZE7.345e-3754.26Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF2.137e-3652.71Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IMT1_MESCR6.435e-3347.29Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
SMT_COPJA1.872e-3251.94(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
COMT1_EUCGL5.099e-3057.73Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
CHOMT_MEDSA3.093e-2750.77Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA2.147e-2042.64(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
ZRP4_MAIZE1.066e-1937.40O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
4OMT_COPJA1.066e-1943.803'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]

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Properties
Property NameValue
Genbank descriptionC05072C12SK PhIFruit1 Citrus clementina cDNA clone C05072C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295449 ID=CX295449; Name=CX295449; organism=Citrus clementina; type=EST; length=731bp
GAGGATGTTATTGAGCATGCCCCACTACATCCACATATTGAGCATGTAGC
GGGTGATATGTTTCAAAGTGTTCCAAAAGGTGACGCCATTTTTCTGAAGT
GGATACTGCACGATTGGGACGATGAACATTGCTTGAAGTTGTTGAAGAAT
TGCTACAAAAGCGTTCCAGAAGATGGAAAGGTAATCGTTGTGGAGTTAAT
GCTTCCAGAAGTTCCTAATACAAGCATTGAATCAAAATCAAATTCCCATA
TTGACGTGCTTATGATGACTCAAAATCCCGGTGGAAAGGAGAGAACAAAG
CATGAATTCATGACCCTGGCTACTGGCGCTGGTTTTAGTGGGATCAGATT
TGATCTTGTTACTGGTAATTTCTGGGTTATGGAGTTCTATAAGTAGAGTG
CTTGCCCATGCATCCTAGAGACGAGCAACAAGCCATGCATTTAACAAGCT
TCCAACGTACCATAGCCATGCTTGAGAAGAGGAGTCTACGACTTAGTAAT
AAGTTTCTTTGAAATAAATGGGTGCTTGAGACGTCGTCTATTAACTACCT
GTGCTATATTGCCCATATTTCCTTTTATTTCTCGTATTTCATGTGTTATT
TTCTAGAGTGTCTTTTTTTGTTCTTAATGTAGTTAATACTGTAGATCATA
TGTTTTCAATTGGCTCTTATAAATGCCTAAAGCTGTTTGAATAAGGATGC
AGACAAATTATTTCCTAAGCTATTCTCTTTA
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