CX295460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y2558_ORYSJ (B3 domain-containing protein Os02g0455800 OS=Oryza sativa subsp. japonica GN=Os02g0455800 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 250 IIGEGEAEEDRVLISLEKEHMFDKVVTPSDV-GKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDR--NGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFI 612 I+G E+ + VL E E++F+K + PSD+ L IP++H K F + + ++ F+D GK W FRY W S+ + +TKGW FV++K L AGD +SF RG A GRLFI Sbjct: 11 IVGAEESVDKEVL---EMEYLFEKFLMPSDLCSNTEWLGIPEEHVRK-FGMMLEDRDGYSVIFFQDGVVPGKLWCFRY--WKSNGVHGLTKGWRCFVREKGLKAGDTISFFRG---SACGRLFI 125
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: ARFO_ORYSJ (Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 41/109 (37.61%), Postives = 54/109 (49.54%), Query Frame = 1 Query: 256 GEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRG 579 GEGE + HMF K +T SD +P++ AE FP LD S L +D + WRFR+ Y + +++T GWS FV KKL +GD V F RG Sbjct: 123 GEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG 231
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: ARFB_ORYSJ (Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 46/117 (39.32%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 256 GEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGV-GDLAKG 600 GEGE D V HMF K +T SD +P++ AE FP LD S L +D +G WRFR+ Y + +++T GWS F+ KKL +GD V F RG G+L G Sbjct: 131 GEGE---DAVKRPARIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLG 244
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: ARFC_ORYSJ (Auxin response factor 3 OS=Oryza sativa subsp. japonica GN=ARF3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 238 ETKDIIGEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRG 579 E +D + +G+ E ++ HMF K +T SD +P++ AE FP LD L +D +G WRFR+ Y + +++T GWS FV KKL +GD V F RG Sbjct: 171 EREDDMEDGDEERKSRML-----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRG 280 The following BLAST results are available for this feature:
BLAST of CX295460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295460 ID=CX295460; Name=CX295460; organism=Citrus clementina; type=EST; length=711bpback to top |