CX295493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.539e-50 Identity = 92/162 (56.79%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 26 YC--DPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 499 YC +PC KYYGRGPIQ+++NYNY CG +G ++LLNNPDL+ATN V+SFKSAIWFWMTAQ PKPSCH+VI W PSA D A RLPGYG+ TNIINGG+ECG+G + V++RIGF+ +C G+ PGDN+DC NQ+ + L+ ++M Sbjct: 179 YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIG--QNLLNNPDLVATN----AVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLETM 334
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.456e-49 Identity = 94/164 (57.32%), Postives = 118/164 (71.95%), Query Frame = 2 Query: 20 SDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 499 S YC + +PC +YYGRGPIQ++WNYNY +CG +G DLLNNPDL+AT+ V+SFK+A+WFWMT Q PKPSCH+VI W PS+ D AGRLPGYG TNIINGG+ECG G + V++RIGF+ +C FGI GDNLDC +QRP+G +L S+ Sbjct: 159 STYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIG--VDLLNNPDLVATDP----VISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.902e-49 Identity = 95/164 (57.93%), Postives = 115/164 (70.12%), Query Frame = 2 Query: 20 SDYC--DPNYPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 499 S YC DPNYPC GK Y+GRGP+QL+WNYNY +CG +G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR GYG+ TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 145 SSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIG--VDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.238e-49 Identity = 92/163 (56.44%), Postives = 120/163 (73.62%), Query Frame = 2 Query: 14 ASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMA 490 A++ YC P+ +PC KY+GRGPIQL++NYNY GE +G EDLLNNP+L+A++ V+SFK+A+WFWMT Q PKPSCH+VI +W PS+ D+ AGR+PGYG+ TNIINGG+ECG+G +D V NRIGF+ +C GI G NLDC +QRP+ L A Sbjct: 176 ATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIG--EDLLNNPELVASDP----VVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 9.441e-49 Identity = 90/153 (58.82%), Postives = 111/153 (72.55%), Query Frame = 2 Query: 26 YCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 YC+P +PC KYYGRGPIQ+T+NYNY G+ +G DLLNNPDL+A++ +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIINGG+ECG+G +D V +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 171 YCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIG--SDLLNNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.747e-48 Identity = 91/163 (55.83%), Postives = 118/163 (72.39%), Query Frame = 2 Query: 23 DYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 499 DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFK+A+WFWMT Q PKPSCH+VII W PS+ D A RLPG+G+ TNIINGG+ECG G ++ V++RIGF+ +C G+ PGDNLDC NQR +G L+ ++ Sbjct: 172 DYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.685e-48 Identity = 92/167 (55.09%), Postives = 117/167 (70.06%), Query Frame = 2 Query: 20 SDYCD--PNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 508 S YC P +PC +YYGRGPIQ++WNYNY +CG +G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L+ + +S Sbjct: 167 STYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIG--VDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.685e-48 Identity = 88/156 (56.41%), Postives = 113/156 (72.44%), Query Frame = 2 Query: 17 SSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 SS+YC P+ +PC YYGRGP+QL+WNYNY +CG +G DLLNNPDL++ + V++FK+AIWFWMT Q PKPSCH VI+ +W+PS D AGR+PGYG+ TNIINGG+ECG G + V +RIGF+ +C G+ PG NLDC NQR + Sbjct: 162 SSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIG--SDLLNNPDLVSNDP----VIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYNQRSF 311
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.044e-47 Identity = 92/167 (55.09%), Postives = 116/167 (69.46%), Query Frame = 2 Query: 20 SDYCD--PNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 508 S YC P +PC +YYGRGPIQ++WNYNY +CG +G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L + +S Sbjct: 166 SAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIG--VDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.571e-46 Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = 2 Query: 26 YCDP-NYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 YC P ++PC KYYGRGPIQLT NYNY G+ + EDL+NNPDLL+TN +SFK+AIWFWMT Q KPS H+VI W PSA D +AGR+PGYG+ TNIINGGIECG+G ++ V +R+GF+ +C FG+ PG NLDC+NQR + Sbjct: 174 YCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIK--EDLINNPDLLSTNP----TVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319 The following BLAST results are available for this feature:
BLAST of CX295493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295493 ID=CX295493; Name=CX295493; organism=Citrus clementina; type=EST; length=675bpback to top |