CX295493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 176.407 bits (446), Expect = 1.194e-43 Identity = 87/157 (55.41%), Postives = 112/157 (71.34%), Query Frame = 2 Query: 14 ASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 A+S+YC P+ +PC GK YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG+G + V +RIGF+ +C G+ G+NLDC +QRP+ Sbjct: 167 ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.660e-43 Identity = 82/140 (58.57%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 56 KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 475 +YYGRGPIQLT NY + G +G ++L+NNPDL+AT+ +SFK+AIWFWMT Q KPS H+VII W PSA D A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG+NLDC NQR +G Sbjct: 118 RYYGRGPIQLTNRNNYEKAGTAIG--QELVNNPDLVATD----ATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.660e-43 Identity = 87/157 (55.41%), Postives = 111/157 (70.70%), Query Frame = 2 Query: 14 ASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 A+S+YC P+ +PC GK YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG+G + V +RIGF+ +C + G+NLDC NQRP+ Sbjct: 170 ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.842e-42 Identity = 81/153 (52.94%), Postives = 108/153 (70.59%), Query Frame = 2 Query: 26 YCDPNY--PCRGKYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYG-GNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 475 YC N P YYGRGPIQLT YNY G+ LG DL+NNPDL++++ V++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++GRLPGYG+ TNIINGG ECG G D ++R+G++ +C F + GDN+ C +Q+PYG Sbjct: 108 YCRVNEITPSDPPYYGRGPIQLTHKYNYQLAGDALGL--DLVNNPDLVSSDP----VVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.553e-42 Identity = 83/143 (58.04%), Postives = 103/143 (72.03%), Query Frame = 2 Query: 2 RVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCG 418 R + DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG G + V++RIGF+ +CG Sbjct: 165 REQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.490e-41 Identity = 80/138 (57.97%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 59 YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 +YGRGPIQLT NY G+ +G +DL+NNPDL+AT+ +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A R PGYG+ TNIINGGIECG G N V +RIGF+ +C + PGDNLDC +QR + Sbjct: 113 FYGRGPIQLTGQSNYDLAGQAIG--QDLVNNPDLVATD----ATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.248e-41 Identity = 82/138 (59.42%), Postives = 97/138 (70.29%), Query Frame = 2 Query: 59 YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 YYGRGPIQLT NY G LG DL+ NPDL++T+ V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D AGR+PGYG+ TNIINGGIECG G NDA +RIG++ +C G G NLDC NQR + Sbjct: 128 YYGRGPIQLTGQSNYQAAGNALGL--DLVGNPDLVSTD----AVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.245e-41 Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 56 KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 +YYGRGPIQLT NY + G + +DL+NNPDL+AT+ +SFK+AIWFWMT Q KPS H+VII W PSA D +A R PG G+ TNIINGGIECG G N AV +RIG++ +CG + PGDNLDC NQR + Sbjct: 118 RYYGRGPIQLTNQNNYEKAGNAIR--QDLVNNPDLVATD----ATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.785e-39 Identity = 78/157 (49.68%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 17 SSDYCDP----NYPCRGKYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 +SDYCDP +YPC YYGRGP+QL WNYNY CG LG ++LL+ P+ +AT+ VLSF++A+WFWM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC G +NRI ++ +C + PGDNL C NQ + Sbjct: 154 NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLG--QNLLDEPEKVATDP----VLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.857e-39 Identity = 78/138 (56.52%), Postives = 95/138 (68.84%), Query Frame = 2 Query: 59 YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 472 YYGRGPIQLT NY G+ + +DL+NNPDL+AT+ +SFK+AIWFWMT Q KPSCH+VI W PSA D +A R+PGYG+ TNIINGGIECG G N V +RIG++ + PGDNLDC NQR + Sbjct: 120 YYGRGPIQLTGQSNYDLAGKAIE--QDLVNNPDLVATD----ATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQRNF 251 The following BLAST results are available for this feature:
BLAST of CX295493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295493 ID=CX295493; Name=CX295493; organism=Citrus clementina; type=EST; length=675bpback to top |