CX295493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 52/150 (34.67%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 17 SSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 454 +++YC + YPC +Y+GRGP+QL+WNYNY+ G+ L D LN+PD++ + ++SFK+++WFW+ + VI+D + G+G T IINGG EC + R+G++ +C + G+ PG+NL C Sbjct: 124 ANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHF--DGLNDPDIVGRDP----IISFKTSLWFWI-----RKGVQYVILDPNQ------------GFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 5 VGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 454 + S +YCD +PC GK YYGRGP+Q++WN+NY G+ +G D L +PD +A + VL+F++A+W+W + H+ + G+G T ING +EC AV NR+ ++ FC +FG+ PG NL C Sbjct: 142 IDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGF--DGLGDPDAVARSP----VLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.051e-19 Identity = 57/152 (37.50%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 17 SSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRN-RIGFFTTFCGKFGIQPGDNLDC 454 S+ YCDP +PC KYYGRGP+Q++WNYNY G +G D L +P +A + V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ PG NL C Sbjct: 146 SNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGF--DGLGDPGRVARD----AVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.018e-18 Identity = 55/161 (34.16%), Postives = 78/161 (48.45%), Query Frame = 2 Query: 5 VGAASSDYCDPN----YPCRGK--YYGRGPIQLTWNYNYLRCG-----EGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 454 + AS DYCD YPC Y+GRGPIQL+WN+NY G +GLG E + N+ V+SFK+A+W+WM P +I++ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 142 IDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDV-----------VVSFKTALWYWMQHVRP-------VINQ--------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.599e-18 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 17 SSDYCDPN---YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRN-RIGFFTTFCGKFGIQPGDNLDC 454 S+ YCD + +PC KYYGRGP+Q++WNYNY G +G L +P+ +A + V++FK+A+WFWM N+V+ G+G T ING +EC G N A N R+G++ +C + + PG NL C Sbjct: 157 SNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNG--LADPNRVA----QDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECN-GNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CX295493 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 221 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 358 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CX295493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295493 ID=CX295493; Name=CX295493; organism=Citrus clementina; type=EST; length=675bpback to top |