CX295496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.297e-46 Identity = 89/155 (57.42%), Postives = 110/155 (70.97%), Query Frame = 3 Query: 33 SDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 485 SDYC P+ +PC KYYGRGPIQL++N+NY G +G DLL+NPDL+AT+ +SFK+A+WFWMT Q KPS H+VI W PS D AGR PGYG+ TNI+NGG+ECG+G +D V NRIGF+ +CG FGI G NLDC NQRP+ Sbjct: 181 SDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIG--VDLLSNPDLVATD----ATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.345e-46 Identity = 90/171 (52.63%), Postives = 120/171 (70.18%), Query Frame = 3 Query: 12 REVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE G+ + YC P+ +PC KYYGRGPIQ+++NYNY + G+ +G DL+NNPDL+AT+ V+SFK+A WFWMT Q PKPSCH VI W PS D +AGRLPG+G+ TNIINGG+ECG G V++RIGF+ +C + G+NLDC+NQRP+G L+ ++ Sbjct: 151 REQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIG--VDLVNNPDLVATD----AVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.253e-45 Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 3 Query: 69 KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 485 +YYGRGPIQLT NY R G+G+G G+DL+NNPDL+AT+ ++SF++AIWFWMTAQ KPSCH VII +W PS D A R+PGYG+ TNIINGG+EC G N AV +RIGF+ +CG + G+NLDC+NQ+ + Sbjct: 116 RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDP----IISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.636e-45 Identity = 90/163 (55.21%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 9 YREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 485 +++ ASSDYC P+ +PC +YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ G FK+AIWFWMTAQPPKPS H VI +W PS D AGR+PG+G+ TNIINGGIECG+G + V +RIGF+ +C G+ G+NLDC +QRP+ Sbjct: 109 FKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIG--VDLLANPDLVATDATVG----FKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.636e-45 Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 3 Query: 21 GAASSDYC--DPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 485 G SDYC +PC KYYGRGPIQ+++NYNY G+ +G +LL+NPDL+A++ +SFK+A WFWMT Q PKPSCH V+ +W P+ ND AGR+PGYG+ TNIINGG+ECG+G + V +RIGF+ +C G+ G NLDC NQRP+ Sbjct: 169 GNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIG--SNLLSNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45 Identity = 87/163 (53.37%), Postives = 113/163 (69.33%), Query Frame = 3 Query: 9 YREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 485 +++ A++DYC P+ +PC +YYGRGPIQL+ NYNY G +G DLL NPDL+AT+ +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR PG+G+ TNIINGG+ECG+G + V +RIGF+ +C G+ GDNLDC NQRP+ Sbjct: 109 FKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.061e-44 Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = 3 Query: 9 YREVGAASSDYC--DPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 488 Y + DYC +PC KY+GRGPIQ+++NYNY G +G +LLNNPDL+A + V+SFK+A+WFWMTAQ PKPS H+VI W PS D GR+PG+G+ TNIINGG+EC G N + NRIGF+ +C G+ PG+NLDC+NQRP+G Sbjct: 89 YNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIG--VNLLNNPDLVAND----AVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 2.363e-44 Identity = 85/160 (53.12%), Postives = 111/160 (69.38%), Query Frame = 3 Query: 21 GAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 488 GAA DYC + +PC KYYGRGPIQL++N+NY G+ +G DLL +PDL+A++ +SF +A WFWMT Q PKPSCH V +W PSA+D AGR+PGYG+ TNIINGG+ECG+G +D V +RIGF+ +C G+ NLDC +QRP+G Sbjct: 172 GAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGA--DLLGDPDLVASD----ATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.086e-44 Identity = 79/139 (56.83%), Postives = 101/139 (72.66%), Query Frame = 3 Query: 69 KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 485 +YYGRGPIQLT NY R G+G+G G++L+NNPDL+AT+ ++SFK+AIWFWMT Q KPSCH VII +W PS D A R+PGYG+ TNIING ECG G N A +RIGF+ +CG + G+NLDC+NQ+ + Sbjct: 116 RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDP----IISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.086e-44 Identity = 92/158 (58.23%), Postives = 106/158 (67.09%), Query Frame = 3 Query: 39 YCDP--NYPC-RGKYY-GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNL 497 YCDP NY C GK Y GRGPIQL+WNYNY CG+ L LL P+L+ T+ V+SFK+AIWFWM Q PKPSCH VI W PSA D+ AGR+PGYG+ TNIINGGIECG GG N A +RIGF+ +C G G NLDC QRP+G L Sbjct: 182 YCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKL--PLLQEPELVETDP----VISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333 The following BLAST results are available for this feature:
BLAST of CX295496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295496 ID=CX295496; Name=CX295496; organism=Citrus clementina; type=EST; length=670bpback to top |