CX295509

Overview
NameCX295509
Unique NameCX295509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 119
            KKS +    TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  351 KKSAQAGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 122
            K S      TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  350 KASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 119
            KKS+E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  350 KKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 122
            K S      TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  350 KASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 119
            KKS+E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  350 KKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 119
            KKS +    TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  351 KKSAQAGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 113
            KKS EE   TTGEGL+WGVLFGFGPGLTVETVVLHS+
Sbjct:  351 KKSAEEGLKTTGEGLEWGVLFGFGPGLTVETVVLHSL 387          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 119
            KKS+E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  350 KKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 122
            K S      TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  350 KASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
BLAST of CX295509 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query:    3 KKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 122
            K S      TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  350 KASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
The following BLAST results are available for this feature:
BLAST of CX295509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CHS9_MEDSA1.963e-1179.49Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS7_IPOBA1.963e-1177.50Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS5_SOYBN1.963e-1179.49Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS4_IPOBA1.963e-1177.50Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS3_SOYBN1.963e-1179.49Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS3_MEDSA1.963e-1179.49Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS3_CAMSI1.963e-1183.78Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS2_SOYBN1.963e-1179.49Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS2_IPOBA1.963e-1177.50Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS1_IPOBA1.963e-1177.50Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]

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Properties
Property NameValue
Genbank descriptionC05072H12SK PhIFruit1 Citrus clementina cDNA clone C05072H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295509 ID=CX295509; Name=CX295509; organism=Citrus clementina; type=EST; length=393bp
GGAAGAAGTCTGTTGAGGAAGCGAAAGCCACCACCGGCGAAGGGCTTGAT
TGGGGTGTGCTGTTCGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGT
GCTGCACAGTGTCCCCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGT
TTAGTAGTTCAGTAACTTTATGTTGTATGCTTTCACAGTTGAATTATTGG
TTGATCGTGTGAAGGTTTAGTTTTGTCAATTGAGTTTAAGGCATCGTGCC
TTTTCTCTTATGACGTCACCAAACCTGGGCAACGCTTTGTGTTTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAACCTCGGGGGGGGGCCCGGT
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