CX295512

Overview
NameCX295512
Unique NameCX295512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB1_HOMAM (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Homarus americanus GN=GBETA1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.202e-42
Identity = 82/178 (46.07%), Postives = 120/178 (67.42%), Query Frame = 3
Query:  162 LRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            L+  ++  R+  LD  +     + G  P+  G   +   RTL+GH  K+Y++ W S+   +VSASQDG+LIVW++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC++V  +D  ++TSSGD TC LWDI TG + + F G
Sbjct:   14 LKNTIRDARKNALDTTLV--QATAGMDPI--GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFV--DDNQIVTSSGDMTCALWDIETGQQCTQFTG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB_LYMST (Guanine nucleotide-binding protein subunit beta OS=Lymnaea stagnalis PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.407e-42
Identity = 81/184 (44.02%), Postives = 123/184 (66.85%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRA---PVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            + +LR+  +Q + Q+ +   A    +  +A     + G   +   RTL+GH  K+Y++ W S+   +VSASQDG+LIVW+  T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC+++  +D  ++TSSGD +C LWDI TG +T+ F G
Sbjct:    5 LEALRQETEQLKNQIREARKAAGDTTLAQACSGVEAVGRIQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDGYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFI--DDNSIVTSSGDMSCALWDIETGQQTTSFTG 183          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB1_CAEEL (Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis elegans GN=gpb-1 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41
Identity = 80/183 (43.72%), Postives = 123/183 (67.21%), Query Frame = 3
Query:  147 ETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +    L+ ++++ R+   D  +A  + +    P+  G   +   RTL+GH  K+Y++ W S+   +VSASQDG+LIVW++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC+++  +D  ++TSSGD TC LWDI TG + + F G
Sbjct:    9 QEAEQLKSQIREARKSANDTTLA--TVASNLEPI--GRIQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFL--DDNQIVTSSGDMTCALWDIETGQQCTAFTG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB1_CAEBR (Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis briggsae GN=gpb-1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41
Identity = 80/183 (43.72%), Postives = 123/183 (67.21%), Query Frame = 3
Query:  147 ETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +    L+ ++++ R+   D  +A  + +    P+  G   +   RTL+GH  K+Y++ W S+   +VSASQDG+LIVW++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC+++  +D  ++TSSGD TC LWDI TG + + F G
Sbjct:    9 QEAEQLKSQIREARKSANDTTLA--TVASNLEPI--GRIQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFL--DDNQIVTSSGDMTCALWDIETGQQCTAFTG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB4_RAT (Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus GN=Gnb4 PE=2 SV=4)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 84/184 (45.65%), Postives = 121/184 (65.76%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRAPV---SFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +  LR+  +Q R Q+ D   A    +  +      S G   +   RTL+GH  K+Y++ W  +   +VSASQDG+LI+W++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI+NL +   ++GN+ VSR L GH GY+SCC+++  +D  +ITSSGD TC LWDI TG +T+ F G
Sbjct:    4 LEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT---REGNVRVSRELPGHTGYLSCCRFL--DDGQIITSSGDTTCALWDIETGQQTTTFTG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB4_MOUSE (Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus GN=Gnb4 PE=2 SV=4)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 84/184 (45.65%), Postives = 121/184 (65.76%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRAPV---SFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +  LR+  +Q R Q+ D   A    +  +      S G   +   RTL+GH  K+Y++ W  +   +VSASQDG+LI+W++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI+NL +   ++GN+ VSR L GH GY+SCC+++  +D  +ITSSGD TC LWDI TG +T+ F G
Sbjct:    4 LEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT---REGNVRVSRELPGHTGYLSCCRFL--DDGQIITSSGDTTCALWDIETGQQTTTFTG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB2_RAT (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus GN=Gnb2 PE=1 SV=4)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 82/184 (44.57%), Postives = 120/184 (65.22%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRT---LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +  LR+  +Q R Q+ D   A    +  +      P   +  RT   L+GH  K+Y++ W ++   +VSASQDG+LI+W++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC+++  +D  +ITSSGD TC LWDI TG +T  F G
Sbjct:    4 LEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFL--DDNQIITSSGDTTCALWDIETGQQTVGFAG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB2_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus GN=Gnb2 PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 82/184 (44.57%), Postives = 120/184 (65.22%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRT---LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +  LR+  +Q R Q+ D   A    +  +      P   +  RT   L+GH  K+Y++ W ++   +VSASQDG+LI+W++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC+++  +D  +ITSSGD TC LWDI TG +T  F G
Sbjct:    4 LEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFL--DDNQIITSSGDTTCALWDIETGQQTVGFAG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB2_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Homo sapiens GN=GNB2 PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 82/184 (44.57%), Postives = 120/184 (65.22%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRT---LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +  LR+  +Q R Q+ D   A    +  +      P   +  RT   L+GH  K+Y++ W ++   +VSASQDG+LI+W++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC+++  +D  +ITSSGD TC LWDI TG +T  F G
Sbjct:    4 LEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFL--DDNQIITSSGDTTCALWDIETGQQTVGFAG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB2_BOVIN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Bos taurus GN=GNB2 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 82/184 (44.57%), Postives = 120/184 (65.22%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRT---LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            +  LR+  +Q R Q+ D   A    +  +      P   +  RT   L+GH  K+Y++ W ++   +VSASQDG+LI+W++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI++L +   ++GN+ VSR L GH GY+SCC+++  +D  +ITSSGD TC LWDI TG +T  F G
Sbjct:    4 LEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKT---REGNVRVSRELPGHTGYLSCCRFL--DDNQIITSSGDTTCALWDIETGQQTVGFAG 182          
The following BLAST results are available for this feature:
BLAST of CX295512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GBB1_HOMAM7.202e-4246.07Guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
GBB_LYMST9.407e-4244.02Guanine nucleotide-binding protein subunit beta OS... [more]
GBB1_CAEEL1.605e-4143.72Guanine nucleotide-binding protein subunit beta-1 ... [more]
GBB1_CAEBR1.605e-4143.72Guanine nucleotide-binding protein subunit beta-1 ... [more]
GBB4_RAT2.096e-4145.65Guanine nucleotide-binding protein subunit beta-4 ... [more]
GBB4_MOUSE2.096e-4145.65Guanine nucleotide-binding protein subunit beta-4 ... [more]
GBB2_RAT2.096e-4144.57Guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
GBB2_MOUSE2.096e-4144.57Guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
GBB2_HUMAN2.096e-4144.57Guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
GBB2_BOVIN2.096e-4144.57Guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]

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Properties
Property NameValue
Genbank descriptionC05073A03SK DroRLeaf1 Citrus clementina cDNA clone C05073A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295512 ID=CX295512; Name=CX295512; organism=Citrus clementina; type=EST; length=707bp
TTTCGAGCTTAAAGTTGAAGCAAACATGCGATGTAGAAATTTAAATTTTA
TCTACTCTTTTTTTTTTTTTCCTTGTAAGTTCGATTGATTGATAAAACAT
GTCGTCGTCGGTCTCGGAGCTGAAAGAGAGACACGCGGCGGCCATTGAGA
CGGTTAACAGTCTCAGAGAACGGCTCAAGCAGAAGCGACAGCAGTTGCTC
GACGTAGACGTTGCTGGGTACTCGAGGTCGCAGGGTCGGGCTCCGGTCAG
CTTTGGTCCGACCGATCTAGTTTGTTGTAGGACCTTGCAAGGCCACGCTG
GCAAGGTATATTCATTGGACTGGACTTCTGAAAGGAATCGAATTGTCAGT
GCATCTCAAGATGGAAGGTTAATAGTGTGGAATGCTCTTACAAGCCAGAA
AACTCATGCTATAAAACTGCCTTGTGCTTGGGTAATGACTTGTGCCTTCT
CTCCAACTGGTCAATCTGTTGCCTGTGGTGGTCTTGATAGTGTTTGCTCC
ATTTTCAACCTGAATTCTCCTACTGACAAGGACGGGAATTTACCAGTATC
AAGAATGCTTAGTGGGCACAAGGGTTATGTGTCCTGCTGTCAGTATGTTC
CCGATGAGGACACTCACCTAATTACCAGTTCGGGTGACCAAACCTGTGTT
TTGTGGGATATTACTACGGGCCTTAGAACTTCTGTTTTTGGAGGAGATTT
CAGTCTG
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