CX295516

Overview
NameCX295516
Unique NameCX295516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.536e-20
Identity = 58/138 (42.03%), Postives = 83/138 (60.14%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL--DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            EQ+ EL   G ++++VSSGAV  GRQ+LR   +++ S+    +  + +  D +ACAA G   LM+LY+ LF Q  +T +Q+L+T  D  D+  RK L  T++SLL L +IPI N NDAV    AP    +    DNDS
Sbjct:  109 EQVSELQQSGRQMLIVSSGAVAFGRQKLRQELVMSMSMRQTLRGPSGMTADKRACAASGMPGLMSLYEQLFQQYGITVAQVLLTKPDIDDDQRRKNLQATIESLLSLNIIPIVNANDAV----APDPKLNMHISDNDS 242          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_PROMS (Glutamate 5-kinase OS=Prochlorococcus marinus (strain AS9601) GN=proB PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 3
Query:  279 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            S+G ++ILV+SGAVG+G Q+L  +   N  L+ LQ         A AAVGQ +LM+LYD +F++L +  +Q+L+T +DF   +       T++ L+DL VIPI NEND V+  +  Y D+
Sbjct:   37 SKGNKLILVTSGAVGLGCQKLNIKTRPND-LSTLQ---------ATAAVGQVNLMSLYDKVFNRLGLNIAQILITKADFNSRESFNNASKTLKRLIDLNVIPIVNENDTVANEELKYGDN 146          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_PROM0 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=proB PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 3
Query:  279 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            S+G ++ILV+SGAVG+G Q+L  +   N  L+ LQ         A AAVGQ +LM+LYD +F++L +  +Q+L+T +DF   +       T++ L+DL VIPI NEND V+  +  Y D+
Sbjct:   37 SKGNKLILVTSGAVGLGCQKLNIKTRPND-LSTLQ---------ATAAVGQVNLMSLYDKVFNKLGLNIAQILITKADFNSRESFNNASKTLKRLIDLNVIPIVNENDTVANEELKYGDN 146          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SYNJA (Glutamate 5-kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=proB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 53/130 (40.77%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            E L  L SQG+ +ILVSSGAVG+G  RL  R          Q+P    + +A AAVGQ  L+ LYD LFS L+   +Q+L+T  DF +         T   LL + VIPI NEND V+  +  + D+  +
Sbjct:   35 EVLTRLRSQGYAVILVSSGAVGIGCARLGLR----------QRPTAIAEKQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDFVERSRYVNANRTFTQLLQMGVIPIVNENDTVAVEELKFGDNDSL 154          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_HERAR (Glutamate 5-kinase OS=Herminiimonas arsenicoxydans GN=proB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            EQ+ +L + G E++LVSSGA+  G QRL + K          +P    + +ACAAVGQ  L  +Y+T F Q  V ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +  + D+
Sbjct:   37 EQIVQLRALGKEVVLVSSGAIAEGMQRLGFDK----------RPTGVHELQACAAVGQMGLAQIYETSFRQHQVQTAQILLTHADLADRERYLNARSTLFTLLQLGVVPIINENDTVVTDEIKFGDN 153          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_THEEB (Glutamate 5-kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=proB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            E L     +G  ++LVSSGAVGVG  RL             ++PQ     +A AAVGQ  LM +YD LF+ L    +Q+LVT  +F D      +Y+T Q+L +L VIPI NEND V+  +  + D+
Sbjct:   32 EVLCHCQRRGDRVVLVSSGAVGVGAMRLGLT----------ERPQQLAQKQAVAAVGQGHLMRMYDDLFAVLRQPIAQILVTRQNFVDRQSYLNIYNTFQALFELGVIPIVNENDTVAVDELKFGDN 148          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_NITMU (Glutamate 5-kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=proB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            Q+ +L   G E++LVSSGA+  G QRL+++K          +P    + +A AAVGQ  L+  Y+T F + ++ S+Q+L+T  D  D         T+ +LLDL VIPI NEND V+T +  + D+
Sbjct:   38 QIVKLKKTGKEVVLVSSGAIAEGMQRLKWKK----------RPHAVHELQAAAAVGQMGLVQAYETCFRKHELHSAQILLTHEDLSDRKRYLNARSTLATLLDLNVIPIINENDTVATDEIRFGDN 153          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_PROM9 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=proB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 3
Query:  282 QGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            +G ++ILV+SGAVG+G Q+L  +   N  L+ LQ         A AAVGQ +LM+LYD +F++L    +Q+L+T +DF   +       T++ L+DL VIPI NEND V+  +  Y D+
Sbjct:   38 KGNKLILVTSGAVGLGCQKLNIKTRPND-LSTLQ---------ATAAVGQVNLMSLYDKIFNKLGHNIAQILITKADFNSRESFNNASKTLKKLIDLNVIPIVNENDTVANEELKYGDN 146          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_PROM2 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=proB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 3
Query:  279 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            S+G +IILV+SGAVG+G Q+L      N  L+ LQ         A AAVGQ +LM+LYD +F++L    +Q+L+T +DF           T++ L+DL VIPI NEND V+  +  Y D+
Sbjct:   37 SKGNKIILVTSGAVGLGCQKLNIETRPND-LSTLQ---------ATAAVGQVNLMSLYDKVFNKLGHNIAQILITKADFNSRKSFNNASKTLKKLIDLNVIPIVNENDTVANEELKYGDN 146          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROJ_BACSU (Glutamate 5-kinase 2 OS=Bacillus subtilis GN=proJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            +Q+ +L   G+E+ILVSSGAV  G     YRKL       +Q+P+   + +A A++GQ  LM  Y  LF      +SQ+L+T SDF DE     + +T+  LL+  +IPI NEND V+  +  + D+
Sbjct:   36 DQVVKLKDAGYEVILVSSGAVAAG-----YRKL-----GFIQRPEKLPEKQASASIGQGLLMEAYSKLFLAHGYVASQILITRSDFSDEYRYNNVRNTMNVLLERGIIPIINENDTVTVNRLKFGDN 152          
The following BLAST results are available for this feature:
BLAST of CX295516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
ALH13_CAEEL1.536e-2042.03Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
PROB_PROMS1.757e-1641.67Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_PROM01.757e-1641.67Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_SYNJA2.295e-1640.77Glutamate 5-kinase OS=Synechococcus sp. (strain JA... [more]
PROB_HERAR2.997e-1638.58Glutamate 5-kinase OS=Herminiimonas arsenicoxydans... [more]
PROB_THEEB6.677e-1640.16Glutamate 5-kinase OS=Thermosynechococcus elongatu... [more]
PROB_NITMU6.677e-1638.10Glutamate 5-kinase OS=Nitrosospira multiformis (st... [more]
PROB_PROM98.720e-1641.18Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_PROM28.720e-1642.50Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROJ_BACSU1.139e-1538.58Glutamate 5-kinase 2 OS=Bacillus subtilis GN=proJ ... [more]

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Properties
Property NameValue
Genbank descriptionC05073A07SK DroRLeaf1 Citrus clementina cDNA clone C05073A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295516 ID=CX295516; Name=CX295516; organism=Citrus clementina; type=EST; length=703bp
GAGGCTCACCTCTCGCCCACTCGTTATTATTTAAATTTCCGCGAGCAAAA
GATAATTTGCTCCCAAAGTTTTAATTTGCAAAACTCTCTTTTCCTTCTTC
CTCTCCCCCACACAAAAACACACACATGATGGAATCTTTCCAAGATCATA
CTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGTTAAGGTTGGAACA
GCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGGGAAGGCTTGGAGC
TCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGCTTTGAGATTATTT
TAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAGGCTTAGATACAGA
AAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGCCGCAGAATGAGCT
TGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGTCTCATGGCTCTTT
ATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATCCCAACTTCTTGTG
ACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGCAACTCTATGACAC
TGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATTTTTAATGAAAATG
ACGCAGTTAGTACTAGGAAAGCACCATACGAGGATTCTTCTGGTATATTT
TGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGGAACTAAAGCTGAT
CTT
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