CX295516

Overview
NameCX295516
Unique NameCX295516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_MANSM (Glutamate 5-kinase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=proB PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            QL +L+ +G+ +++V+SGA+  GR  L + KL          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD R+IP+ NENDAV+T +    D+  +
Sbjct:   38 QLAQLHQEGYRLVIVTSGAMAAGRHYLNHPKL----------PPTIASKQLLAAVGQSQLIQTWEQLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNRIIPVVNENDAVATAEIKVGDNDNL 156          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_JANMA (Glutamate 5-kinase OS=Janthinobacterium sp. (strain Marseille) GN=proB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            Q+ +L + G E++LVSSGA+  G QRL + K          +P    + +ACAAVGQ  L  +Y+T F Q DV ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +  + D+
Sbjct:   38 QIAQLRALGKEVVLVSSGAIVEGMQRLGFDK----------RPVGIHELQACAAVGQMGLAQIYETSFRQHDVRTAQILLTHADLADRERYLNARSTLFTLLRLGVVPIINENDTVVTDEIKFGDN 153          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SYNJB (Glutamate 5-kinase OS=Synechococcus sp. GN=proB PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 52/130 (40.00%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            E L  L  QG+ +ILVSSGAVGVG  RL +R          Q+P    + +A AAVGQ  L+ LYD LFS L+   +Q+L+T  D  +         T   LL + VIPI NEND V+  +  + D+  +
Sbjct:   35 EVLTHLRRQGYAVILVSSGAVGVGCARLGWR----------QRPTAIAEKQAVAAVGQGRLIRLYDDLFSALNQPIAQVLLTRGDLVERSRYVNANRTFAQLLQMGVIPIVNENDTVAVEELKFGDNDSL 154          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SYNP6 (Glutamate 5-kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=proB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 49/127 (38.58%), Postives = 66/127 (51.97%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            E + +L  QG+ ++LVSSGAVGVG  RL  R           +P      +A AAVGQ  LM  YD LF+ L    +Q+L+T  D          Y T Q L +L V+PI NEND V+  +  + D+
Sbjct:   35 EVICQLRRQGYNVVLVSSGAVGVGCTRLGLR----------DRPSRIAQRQAIAAVGQGRLMRTYDDLFTTLGQPIAQVLLTRGDLAQRQRYINAYQTFQELFELGVVPIVNENDTVAVEELKFGDN 151          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SYNE7 (Glutamate 5-kinase OS=Synechococcus elongatus (strain PCC 7942) GN=proB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 49/127 (38.58%), Postives = 66/127 (51.97%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            E + +L  QG+ ++LVSSGAVGVG  RL  R           +P      +A AAVGQ  LM  YD LF+ L    +Q+L+T  D          Y T Q L +L V+PI NEND V+  +  + D+
Sbjct:   32 EVICQLRRQGYNVVLVSSGAVGVGCTRLGLR----------DRPSRIAQRQAIAAVGQGRLMRTYDDLFTTLGQPIAQVLLTRGDLAQRQRYINAYQTFQELFELGVVPIVNENDTVAVEELKFGDN 148          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_HAEIG (Glutamate 5-kinase OS=Haemophilus influenzae (strain PittGG) GN=proB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +    D+  +
Sbjct:   33 QIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNHIIPVINENDAVATAEIKVGDNDNL 151          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_HAEIE (Glutamate 5-kinase OS=Haemophilus influenzae (strain PittEE) GN=proB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +    D+  +
Sbjct:   33 QIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNHIIPVINENDAVATAEIKVGDNDNL 151          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_HAEI8 (Glutamate 5-kinase OS=Haemophilus influenzae (strain 86-028NP) GN=proB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +    D+  +
Sbjct:   33 QIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNHIIPVINENDAVATAEIKVGDNDNL 151          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_NOSP7 (Glutamate 5-kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=proB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 53/127 (41.73%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            E L  L SQG  +ILVSSGAVGVG  RL             ++P+     +A AAVGQ  L+ +YD LF+ L    +Q+L+T SD          Y+T Q LL L VIPI NEND V+  +  + D+
Sbjct:   32 ETLCHLRSQGHRVILVSSGAVGVGCARLGLT----------ERPRAIALKQAVAAVGQGRLIRIYDDLFTTLQQAIAQVLLTRSDLVQRSRYLNAYNTFQELLGLGVIPIVNENDTVAIDELKFGDN 148          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_HAEIN (Glutamate 5-kinase OS=Haemophilus influenzae GN=proB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +    D+  +
Sbjct:   33 QIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLYALLDNHIIPVINENDAVATAEIKVGDNDNL 151          
The following BLAST results are available for this feature:
BLAST of CX295516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
PROB_MANSM1.139e-1535.66Glutamate 5-kinase OS=Mannheimia succiniciproducen... [more]
PROB_JANMA1.139e-1538.89Glutamate 5-kinase OS=Janthinobacterium sp. (strai... [more]
PROB_SYNJB1.487e-1540.00Glutamate 5-kinase OS=Synechococcus sp. GN=proB PE... [more]
PROB_SYNP62.537e-1538.58Glutamate 5-kinase OS=Synechococcus sp. (strain AT... [more]
PROB_SYNE72.537e-1538.58Glutamate 5-kinase OS=Synechococcus elongatus (str... [more]
PROB_HAEIG3.314e-1534.88Glutamate 5-kinase OS=Haemophilus influenzae (stra... [more]
PROB_HAEIE3.314e-1534.88Glutamate 5-kinase OS=Haemophilus influenzae (stra... [more]
PROB_HAEI83.314e-1534.88Glutamate 5-kinase OS=Haemophilus influenzae (stra... [more]
PROB_NOSP74.328e-1541.73Glutamate 5-kinase OS=Nostoc punctiforme (strain A... [more]
PROB_HAEIN4.328e-1534.88Glutamate 5-kinase OS=Haemophilus influenzae GN=pr... [more]

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Properties
Property NameValue
Genbank descriptionC05073A07SK DroRLeaf1 Citrus clementina cDNA clone C05073A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295516 ID=CX295516; Name=CX295516; organism=Citrus clementina; type=EST; length=703bp
GAGGCTCACCTCTCGCCCACTCGTTATTATTTAAATTTCCGCGAGCAAAA
GATAATTTGCTCCCAAAGTTTTAATTTGCAAAACTCTCTTTTCCTTCTTC
CTCTCCCCCACACAAAAACACACACATGATGGAATCTTTCCAAGATCATA
CTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGTTAAGGTTGGAACA
GCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGGGAAGGCTTGGAGC
TCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGCTTTGAGATTATTT
TAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAGGCTTAGATACAGA
AAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGCCGCAGAATGAGCT
TGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGTCTCATGGCTCTTT
ATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATCCCAACTTCTTGTG
ACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGCAACTCTATGACAC
TGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATTTTTAATGAAAATG
ACGCAGTTAGTACTAGGAAAGCACCATACGAGGATTCTTCTGGTATATTT
TGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGGAACTAAAGCTGAT
CTT
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