CX295516

Overview
NameCX295516
Unique NameCX295516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ANASP (Glutamate 5-kinase OS=Anabaena sp. (strain PCC 7120) GN=proB PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            E L  L  QG  +ILVSSGAVGVG  RL             ++P+     +A AAVGQ  LM +YD LF+ L    +Q+L+T SD         +Y+T + LL L VIP+ NEND V+  +  + D+
Sbjct:   41 ETLSHLRQQGNRVILVSSGAVGVGCARLGLT----------ERPKAIALKQAVAAVGQGRLMRVYDDLFTTLQQPIAQVLLTRSDLVQRSRYLNVYNTFRELLALGVIPVVNENDTVAVDELKFGDN 157          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERPY (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERPS (Glutamate 5-kinase OS=Yersinia pseudotuberculosis GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERPP (Glutamate 5-kinase OS=Yersinia pestis (strain Pestoides F) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERPN (Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERPG (Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERPE (Glutamate 5-kinase OS=Yersinia pestis GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERPB (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERP3 (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_YERE8 (Glutamate 5-kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNL 152          
The following BLAST results are available for this feature:
BLAST of CX295516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
PROB_ANASP1.259e-1440.16Glutamate 5-kinase OS=Anabaena sp. (strain PCC 712... [more]
PROB_YERPY1.645e-1434.11Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERPS1.645e-1434.11Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERPP1.645e-1434.11Glutamate 5-kinase OS=Yersinia pestis (strain Pest... [more]
PROB_YERPN1.645e-1434.11Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua ... [more]
PROB_YERPG1.645e-1434.11Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua ... [more]
PROB_YERPE1.645e-1434.11Glutamate 5-kinase OS=Yersinia pestis GN=proB PE=3... [more]
PROB_YERPB1.645e-1434.11Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERP31.645e-1434.11Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERE81.645e-1434.11Glutamate 5-kinase OS=Yersinia enterocolitica sero... [more]

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Properties
Property NameValue
Genbank descriptionC05073A07SK DroRLeaf1 Citrus clementina cDNA clone C05073A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295516 ID=CX295516; Name=CX295516; organism=Citrus clementina; type=EST; length=703bp
GAGGCTCACCTCTCGCCCACTCGTTATTATTTAAATTTCCGCGAGCAAAA
GATAATTTGCTCCCAAAGTTTTAATTTGCAAAACTCTCTTTTCCTTCTTC
CTCTCCCCCACACAAAAACACACACATGATGGAATCTTTCCAAGATCATA
CTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGTTAAGGTTGGAACA
GCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGGGAAGGCTTGGAGC
TCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGCTTTGAGATTATTT
TAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAGGCTTAGATACAGA
AAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGCCGCAGAATGAGCT
TGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGTCTCATGGCTCTTT
ATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATCCCAACTTCTTGTG
ACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGCAACTCTATGACAC
TGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATTTTTAATGAAAATG
ACGCAGTTAGTACTAGGAAAGCACCATACGAGGATTCTTCTGGTATATTT
TGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGGAACTAAAGCTGAT
CTT
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