CX295516

Overview
NameCX295516
Unique NameCX295516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SHISS (Glutamate 5-kinase OS=Shigella sonnei (strain Ss046) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SHIFL (Glutamate 5-kinase OS=Shigella flexneri GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SHIF8 (Glutamate 5-kinase OS=Shigella flexneri serotype 5b (strain 8401) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SHIDS (Glutamate 5-kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SHIBS (Glutamate 5-kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SHIB3 (Glutamate 5-kinase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SALTY (Glutamate 5-kinase OS=Salmonella typhimurium GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SALTI (Glutamate 5-kinase OS=Salmonella typhi GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SALSV (Glutamate 5-kinase OS=Salmonella schwarzengrund (strain CVM19633) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SALPK (Glutamate 5-kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNL 152
The following BLAST results are available for this feature:
BLAST of CX295516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
PROB_SHISS1.645e-1434.11Glutamate 5-kinase OS=Shigella sonnei (strain Ss04... [more]
PROB_SHIFL1.645e-1434.11Glutamate 5-kinase OS=Shigella flexneri GN=proB PE... [more]
PROB_SHIF81.645e-1434.11Glutamate 5-kinase OS=Shigella flexneri serotype 5... [more]
PROB_SHIDS1.645e-1434.11Glutamate 5-kinase OS=Shigella dysenteriae serotyp... [more]
PROB_SHIBS1.645e-1434.11Glutamate 5-kinase OS=Shigella boydii serotype 4 (... [more]
PROB_SHIB31.645e-1434.11Glutamate 5-kinase OS=Shigella boydii serotype 18 ... [more]
PROB_SALTY1.645e-1434.11Glutamate 5-kinase OS=Salmonella typhimurium GN=pr... [more]
PROB_SALTI1.645e-1434.11Glutamate 5-kinase OS=Salmonella typhi GN=proB PE=... [more]
PROB_SALSV1.645e-1434.11Glutamate 5-kinase OS=Salmonella schwarzengrund (s... [more]
PROB_SALPK1.645e-1434.11Glutamate 5-kinase OS=Salmonella paratyphi A (stra... [more]

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Properties
Property NameValue
Genbank descriptionC05073A07SK DroRLeaf1 Citrus clementina cDNA clone C05073A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295516 ID=CX295516; Name=CX295516; organism=Citrus clementina; type=EST; length=703bp
GAGGCTCACCTCTCGCCCACTCGTTATTATTTAAATTTCCGCGAGCAAAA
GATAATTTGCTCCCAAAGTTTTAATTTGCAAAACTCTCTTTTCCTTCTTC
CTCTCCCCCACACAAAAACACACACATGATGGAATCTTTCCAAGATCATA
CTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGTTAAGGTTGGAACA
GCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGGGAAGGCTTGGAGC
TCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGCTTTGAGATTATTT
TAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAGGCTTAGATACAGA
AAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGCCGCAGAATGAGCT
TGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGTCTCATGGCTCTTT
ATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATCCCAACTTCTTGTG
ACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGCAACTCTATGACAC
TGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATTTTTAATGAAAATG
ACGCAGTTAGTACTAGGAAAGCACCATACGAGGATTCTTCTGGTATATTT
TGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGGAACTAAAGCTGAT
CTT
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