CX295516

Overview
NameCX295516
Unique NameCX295516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECOL5 (Glutamate 5-kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECOK1 (Glutamate 5-kinase OS=Escherichia coli O1:K1 / APEC GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECOHS (Glutamate 5-kinase OS=Escherichia coli O9:H4 (strain HS) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECODH (Glutamate 5-kinase OS=Escherichia coli (strain K12 / DH10B) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECOBW (Glutamate 5-kinase OS=Escherichia coli (strain K12 / BW2952) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO8A (Glutamate 5-kinase OS=Escherichia coli O8 (strain IAI1) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO81 (Glutamate 5-kinase OS=Escherichia coli O81 (strain ED1a) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO7I (Glutamate 5-kinase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO5E (Glutamate 5-kinase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
[Close]
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO57 (Glutamate 5-kinase OS=Escherichia coli O157:H7 GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3 
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152
The following BLAST results are available for this feature:
BLAST of CX295516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
PROB_ECOL51.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O6:K15:H31 ... [more]
PROB_ECOK11.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O1:K1 / APE... [more]
PROB_ECOHS1.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O9:H4 (stra... [more]
PROB_ECODH1.645e-1434.11Glutamate 5-kinase OS=Escherichia coli (strain K12... [more]
PROB_ECOBW1.645e-1434.11Glutamate 5-kinase OS=Escherichia coli (strain K12... [more]
PROB_ECO8A1.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O8 (strain ... [more]
PROB_ECO811.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O81 (strain... [more]
PROB_ECO7I1.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O7:K1 (stra... [more]
PROB_ECO5E1.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O157:H7 (st... [more]
PROB_ECO571.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O157:H7 GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05073A07SK DroRLeaf1 Citrus clementina cDNA clone C05073A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295516 ID=CX295516; Name=CX295516; organism=Citrus clementina; type=EST; length=703bp
GAGGCTCACCTCTCGCCCACTCGTTATTATTTAAATTTCCGCGAGCAAAA
GATAATTTGCTCCCAAAGTTTTAATTTGCAAAACTCTCTTTTCCTTCTTC
CTCTCCCCCACACAAAAACACACACATGATGGAATCTTTCCAAGATCATA
CTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGTTAAGGTTGGAACA
GCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGGGAAGGCTTGGAGC
TCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGCTTTGAGATTATTT
TAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAGGCTTAGATACAGA
AAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGCCGCAGAATGAGCT
TGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGTCTCATGGCTCTTT
ATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATCCCAACTTCTTGTG
ACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGCAACTCTATGACAC
TGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATTTTTAATGAAAATG
ACGCAGTTAGTACTAGGAAAGCACCATACGAGGATTCTTCTGGTATATTT
TGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGGAACTAAAGCTGAT
CTT
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