CX295516

Overview
NameCX295516
Unique NameCX295516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO55 (Glutamate 5-kinase OS=Escherichia coli (strain 55989 / EAEC) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO45 (Glutamate 5-kinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO27 (Glutamate 5-kinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_ECO24 (Glutamate 5-kinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_CITK8 (Glutamate 5-kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +    D+  +
Sbjct:   34 QCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNL 152          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_CARHZ (Glutamate 5-kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 3
Query:  270 ELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            +L + GFE+I+VSSGA+  G  RL          A  +KP+N  + +ACAAVGQ  LM LY+  FS+  V ++Q+L+T  D            T  +LL+  V+P+ NEND V+  +  + D+
Sbjct:   42 DLKNAGFEVIIVSSGAIAAGMGRL----------ALPEKPKNLPEKQACAAVGQGVLMHLYEKFFSEYQVIAAQVLLTGEDLAVRKRFLNAKHTFSALLNYGVVPVVNENDTVAVEEIRFGDN 154          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB2_BACLD (Glutamate 5-kinase 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=proB2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            EQ+  L  +G E++LVSSGAV  G     YRKL       + +P    + +A A+VGQ  L+  Y  LF      +SQ+L+T SDF DE     + +T+  LL   +IPI NEND V+  +  + D+
Sbjct:   34 EQIVRLKDEGHEVLLVSSGAVAAG-----YRKL-----GFINRPDTLPEKQASASVGQGLLIEAYSKLFLSHGYIASQILITKSDFSDEKRYNNVRNTMNVLLKRGIIPIINENDTVTVNRLKFGDN 150          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_THIDA (Glutamate 5-kinase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 614
            EQ+  L  QG E++LVSSGA+  G  RL ++K          K  NEL  +A AAVGQ  L+  Y+++F    + ++Q+L+T  D  D         T+++LL+LRV+PI NEND V+T
Sbjct:   38 EQIAALAEQGKEVVLVSSGAIAEGIARLGWKKR--------PKAVNEL--QAAAAVGQMGLVQAYESIFRTHKLHAAQVLLTHEDLADRTRYLNARSTLRTLLELRVVPIINENDTVAT 146          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_SYNP2 (Glutamate 5-kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 638
            E L  L  +G  +ILVSSGAVGVG   L+            ++P+   + +A AAVGQ  L+ LYD LF+ L    +Q+L+T  D  D      + + + ++LDL VIPI NEND V+  +  + D+
Sbjct:   32 ETLTRLKQKGHRVILVSSGAVGVGCGVLKRS----------ERPKKIAEKQAIAAVGQGRLIRLYDDLFTSLQQAIAQVLLTRRDLVDRTSYLTVQEALNAMLDLSVIPIVNENDTVAVDELKFGDN 148          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: PROB_PHOLL (Glutamate 5-kinase OS=Photorhabdus luminescens subsp. laumondii GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 45/129 (34.88%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  261 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 647
            Q  + + +G  II+V+SGA+  GR+ L Y  L          P      +  AAVGQS L+ L++  FS   +   Q+L+T +D  D +      DT+Q+LLD R++P+ NENDAV+T +    D+  +
Sbjct:   35 QCAQQHEKGHRIIIVTSGAIAAGREHLGYPDL----------PATIASKQLLAAVGQSRLIQLWEQFFSIYGIHVGQMLLTRADLEDRERFLNARDTLQALLDNRIVPVINENDAVATAEIKVGDNDNL 153          
The following BLAST results are available for this feature:
BLAST of CX295516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
PROB_ECO551.645e-1434.11Glutamate 5-kinase OS=Escherichia coli (strain 559... [more]
PROB_ECO451.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O45:K1 (str... [more]
PROB_ECO271.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O127:H6 (st... [more]
PROB_ECO241.645e-1434.11Glutamate 5-kinase OS=Escherichia coli O139:H28 (s... [more]
PROB_CITK81.645e-1434.11Glutamate 5-kinase OS=Citrobacter koseri (strain A... [more]
PROB_CARHZ1.645e-1437.40Glutamate 5-kinase OS=Carboxydothermus hydrogenofo... [more]
PROB2_BACLD1.645e-1437.80Glutamate 5-kinase 2 OS=Bacillus licheniformis (st... [more]
PROB_THIDA2.148e-1440.34Glutamate 5-kinase OS=Thiobacillus denitrificans (... [more]
PROB_SYNP22.148e-1437.80Glutamate 5-kinase OS=Synechococcus sp. (strain AT... [more]
PROB_PHOLL2.148e-1434.88Glutamate 5-kinase OS=Photorhabdus luminescens sub... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05073A07SK DroRLeaf1 Citrus clementina cDNA clone C05073A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295516 ID=CX295516; Name=CX295516; organism=Citrus clementina; type=EST; length=703bp
GAGGCTCACCTCTCGCCCACTCGTTATTATTTAAATTTCCGCGAGCAAAA
GATAATTTGCTCCCAAAGTTTTAATTTGCAAAACTCTCTTTTCCTTCTTC
CTCTCCCCCACACAAAAACACACACATGATGGAATCTTTCCAAGATCATA
CTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGTTAAGGTTGGAACA
GCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGGGAAGGCTTGGAGC
TCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGCTTTGAGATTATTT
TAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAGGCTTAGATACAGA
AAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGCCGCAGAATGAGCT
TGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGTCTCATGGCTCTTT
ATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATCCCAACTTCTTGTG
ACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGCAACTCTATGACAC
TGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATTTTTAATGAAAATG
ACGCAGTTAGTACTAGGAAAGCACCATACGAGGATTCTTCTGGTATATTT
TGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGGAACTAAAGCTGAT
CTT
back to top