CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RB33A_HUMAN (Ras-related protein Rab-33A OS=Homo sapiens GN=RAB33A PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 51/121 (42.15%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 295 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV-IMLVGNKADLR 651 +FK+++IGDS VGK+ L RF F ++++TIGV+F +++ ++ + +K Q+WDTAGQER+R ++ YYR + VYDVT+ +F N++ W++E H +V +LVGNK DLR Sbjct: 36 IFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLR 156
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RABT2_DICDI (Ras-related protein RabT2 OS=Dictyostelium discoideum GN=rabT2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 58/128 (45.31%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 274 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIR-VDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL--RDHTDSNIVIMLVGNKADL 648 ADDDY+ L KV+++GD GK ++L R+ NEF L S+IGV+F R V+ K K QIWD ER+R+IT AYYRGA G +L+YD T +F N++ W+ E+ + +N I+++GNK DL Sbjct: 19 ADDDYE-LIKVLMLGDYKTGKGSVLRRYHYNEFEL-GVSSIGVDFVIRDYGIVNGKYYKIQIWDANSCERFRSITQAYYRGAHGFMLLYDCTNQESFNNLQFWINEIINKSPNSNNSTIVIIGNKCDL 144
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 49/122 (40.16%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 295 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL----RDHTDSNIVIMLVGNKADL 648 L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ ++ DD++ QIWDTAGQER++++ A+YRGA +LV+DV +F+N+ W +E N +++GNK D+ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDV 129
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB7L_RAT (Ras-related protein Rab-7L1 OS=Rattus norvegicus GN=Rab7l1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 50/125 (40.00%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 289 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIR-VDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH----TDSNIVIMLVGNKADL 648 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L + + +L+ NK+DL Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDL 129
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB7L_PONAB (Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 52/129 (40.31%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 289 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD-KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI--------MLVGNKADL 648 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L DS + + +L+ NK DL Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL----DSKLTLPNGEPVPCLLLANKCDL 129
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB7L_MOUSE (Ras-related protein Rab-7L1 OS=Mus musculus GN=Rab7l1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 50/125 (40.00%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 289 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIR-VDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH----TDSNIVIMLVGNKADL 648 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L + + +L+ NK+DL Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDL 129
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB7L_HUMAN (Ras-related protein Rab-7L1 OS=Homo sapiens GN=RAB7L1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 52/129 (40.31%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 289 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD-KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI--------MLVGNKADL 648 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L DS + + +L+ NK DL Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL----DSKLTLPNGEPVPCLLLANKCDL 129
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB44_MOUSE (Ras-related protein Rab-44 OS=Mus musculus GN=Rab44 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 D DYL+ VV +GDS VGK++ L + F+ +T+GV+F +++ VD+K Q+WDTAGQERY ++T R A G +L+YDVT +F +V WL L+D + ++L+GNK D R V Sbjct: 533 DPDYLYHVVFLGDSNVGKTSFLHLLHHDAFATGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERYHSLTRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKMDCEEERQV 660
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RB33B_MOUSE (Ras-related protein Rab-33B OS=Mus musculus GN=Rab33b PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.225e-22 Identity = 52/121 (42.98%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 295 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN-IVIMLVGNKADLR 651 +FK+++IGDS VGK+ L RF F +++TIGV+F R++ +D + +K Q+WDTAGQER+R ++ YYR + VYD+T +F ++ W++E + H +N I +LVGNK DLR Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLR 153
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB23_HUMAN (Ras-related protein Rab-23 OS=Homo sapiens GN=RAB23 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 52/124 (41.94%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 277 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 648 ++D + K+V++G+ VGKS+++ R+ K F+ + K TIGV+F R I+V+D+ V+ +WDTAGQE + AIT AYYRGA +LV+ T +FE V W +++ +I +LV NK DL Sbjct: 3 EEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEV-GDIPTVLVQNKIDL 125 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |