CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB28_BOVIN (Ras-related protein Rab-28 OS=Bos taurus GN=RAB28 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1 Query: 277 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW---LKELRDHTDSNIVIMLVGNKADLRHLRAV 666 ++ D K+V++GD GK++L + F + F + K TIG++F R I + + V Q+WD GQ + Y GA G LLVYDVT + +FEN+E W +K++ + +++ ++ LVGNK DL H+R V Sbjct: 6 EESLDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGSLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDVTNYQSFENLEDWYSVVKKVSEESETQPLVALVGNKIDLEHMRTV 139
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB28_PONAB (Ras-related protein Rab-28 OS=Pongo abelii GN=RAB28 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.688e-19 Identity = 49/134 (36.57%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 277 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW---LKELRDHTDSNIVIMLVGNKADLRHLRAV 666 ++ D K+V++GD GK++L + F + F K TIG++F R I + + V QIWD GQ + Y GA G LLVYD+T + +FEN+E W +K++ + +++ ++ LVGNK DL H+R + Sbjct: 6 EESQDRQLKIVVLGDGASGKTSLATCFAQETFGKRYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETRPLVALVGNKIDLEHMRTI 139
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RBL2A_HUMAN (Rab-like protein 2A OS=Homo sapiens GN=RABL2A PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 262 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 645 G Y ADD+ K++ +GDS VGKS L+ RF + F + ST + + VD K + WDTAGQER++++ ++YY A ++V+D+ R VT+ N+ W ELR+ I ++V NK D Sbjct: 14 GKYDADDNV----KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFR-PEIPCIVVANKID 136
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19 Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 295 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 +FK++LIGD G GK+ L+ R EF ++ +T+GVE + V + +WDTAGQERY + Y+ + A++++DV T+ NV+RW ++L NI I++ GNK D+ H Sbjct: 10 IFKLILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDL-VRVCGNIPIVICGNKVDIMH 128
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_TETPY (GTP-binding nuclear protein Ran OS=Tetrahymena pyriformis PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19 Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 645 FK+VL+GD GVGK+ ++R EF +T GV + + ++ IWDTAGQE+ + YY GA A++++DVT +T++N+ +W K+L N+ I+LVGNK D Sbjct: 12 FKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMILHTTKGAIRFNIWDTAGQEKLGGLREGYYIGADAAIMMFDVTSRITYKNIPKWHKDL-TRICENVPIVLVGNKVD 126
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RBL2B_HUMAN (Rab-like protein 2B OS=Homo sapiens GN=RABL2B PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 262 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 645 G Y ADD+ K++ +GDS VGKS L+ RF + F + ST + + VD + + WDTAGQER++++ ++YY A ++V+DV R VT+ N+ W ELR+ I ++V NK D Sbjct: 14 GKYDADDNV----KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFR-PEIPCIVVANKID 136
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_TETTH (GTP-binding nuclear protein Ran OS=Tetrahymena thermophila PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSLRMLS 684 FK+VL+GD GVGK+ ++R EF +T GV + + ++ IWDTAGQE+ + YY GA A++++DVT +T++N+ +W K+L NI I+LVGNK D + R V R ++ Sbjct: 12 FKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMVLYTTKGPIRFNIWDTAGQEKLGGLREGYYIGANAAIMMFDVTSRITYKNIPKWHKDL-TRICENIPIVLVGNKVDSKD-RKVKARQIT 138
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB28_RAT (Ras-related protein Rab-28 OS=Rattus norvegicus GN=Rab28 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 49/134 (36.57%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 277 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW---LKELRDHTDSNIVIMLVGNKADLRHLRAV 666 ++ D K+V++GD GK++L + F + F + K TIG++F R I + + V Q+WD GQ + Y GA G LLVYD+T + +FEN+E W +K + + +++ ++ LVGNK DL H+R V Sbjct: 6 EESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTV 139
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB28_MOUSE (Ras-related protein Rab-28 OS=Mus musculus GN=Rab28 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 49/134 (36.57%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 277 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW---LKELRDHTDSNIVIMLVGNKADLRHLRAV 666 ++ D K+V++GD GK++L + F + F + K TIG++F R I + + V Q+WD GQ + Y GA G LLVYD+T + +FEN+E W +K + + +++ ++ LVGNK DL H+R V Sbjct: 6 EESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTV 139
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB24_HUMAN (Ras-related protein Rab-24 OS=Homo sapiens GN=RAB24 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLES-KSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 648 KVV++G VGK++L+ R+ + F + ++TIG F + + V D+ V IWDTAG ERY A++ YYRGA A++ YD+T +FE + W+KELR + I L G K+DL Sbjct: 9 KVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRS-LEEGCQIYLCGTKSDL 124 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |