CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_DROME (GTP-binding nuclear protein Ran OS=Drosophila melanogaster GN=ran PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651 FK VL+GD G GK+ + R EF + +T+GVE + ++ +WDTAGQE++ + YY A++++DVT VT++NV W ++L NI I+L GNK D++ Sbjct: 11 FKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIK 127
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 42/119 (35.29%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH---TDSNIVIMLVGNKADL 648 K++++G GVGK++LL ++ F E ++T+G ++ I + D +K QIWDT GQER+R++ S +Y+G+ G +L +DVT +FE ++ W ++ + + ++L+GNK DL Sbjct: 10 KLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDL 128
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: GSP1_YARLI (GTP-binding nuclear protein GSP1/Ran OS=Yarrowia lipolytica GN=GSP1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651 FK+VL+GD G GK+ + R EF +T+GVE + D ++ +WDTAGQE++ + YY ++++DVT +T++NV W ++L NI I+L GNK D++ Sbjct: 8 FKLVLVGDGGTGKTTFVKRHETGEFVNRYNATLGVEVHPLNFATDCGNIRFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVK 124
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: GSP1_NEUCR (GTP-binding nuclear protein GSP1/Ran OS=Neurospora crassa GN=gsp-1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651 FK+VL+GD G GK+ + R EF + +T+GVE + ++ +WDTAGQE++ + YY ++++DVT +T++NV W ++L NI I+L GNK D++ Sbjct: 8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYMATLGVEVHPLGFSTNFGQIQFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDL-TRVCENIPIVLCGNKVDVK 124
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RB32C_DICDI (Ras-related protein Rab-32C OS=Dictyostelium discoideum GN=rab32C PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 43/126 (34.13%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 277 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH--TDSNIVIMLVGNKADL 648 +DD K++++G GK++++ R+ N F + K TIGV+F + + + + V Q+WD AGQER+ +T Y++ A GA++V+D TR TF + W ++ D+ + N+ +L+ NK DL Sbjct: 22 NDDEAISLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVLLQLWDIAGQERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDI-DYCFNNENLPTILLANKCDL 146
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 295 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM----LVGNKAD 645 + KVV+IG+ VGK+++L R+ F + K TIGV+F + V + +V Q+WDT+GQER+R++ +YYRGA +LV+DVT T +++ W + + T+ I+ ++GNK D Sbjct: 7 IIKVVIIGEKSVGKTSILRRYVDKRF-VTLKPTIGVDF----VMVSENMVTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKID 122
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: GSP1_CANAL (GTP-binding nuclear protein GSP1/Ran OS=Candida albicans GN=GSP1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651 FK+VL+GD G GK+ + R EF + +T+GVE + +K +WDTAGQE++ + YY ++++DVT +T++NV W ++L NI I+L GNK D++ Sbjct: 8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVNPLGFHTNFGELKFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVK 124
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSJ (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. japonica GN=RAN2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RABH_DICDI (Ras-related protein RabH OS=Dictyostelium discoideum GN=rabH PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 40/118 (33.90%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 K+ +IGD VGKS+LL RF + F ++K ++G F +++ + + + QI DT+G E++R++ +++Y G L+VYD++ TFEN + WL E + + ++V +K DL + Sbjct: 9 KLTIIGDWNVGKSSLLYRFFNDVFYEQTKLSMGEHFFYKTVLIRGESIDLQITDTSGMEKFRSLNNSFYSNLDGILIVYDISDQETFENTKLWLNEANKLAPKDCIKIIVASKFDLEN 126 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |