CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_PLAFA (GTP-binding nuclear protein Ran OS=Plasmodium falciparum PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 40/126 (31.75%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 280 DDYDYL--FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651 D +Y+ +K++L+GD GVGK+ + R EF + T+GVE + + + +WDTAGQE++ + YY + A++++DV+ +T++NV W +++ I ++LVGNK D++ Sbjct: 2 DSQEYIPQYKLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFDVSSRITYKNVPNWYRDI-TRVCETIPMVLVGNKVDVK 126
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |