CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN1B_LOTJA (GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 2 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 119
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN1A_LOTJA (GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 654 FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT +T++NV W ++L NI I+L GNK D+++ Sbjct: 2 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 119
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_BRUMA (GTP-binding nuclear protein Ran OS=Brugia malayi PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651 FK+VL+GD G GK+ + R +F + +T+GVE + ++ +WDTAGQE++ + YY A ++DVT VT++NV W ++L NI I+L GNK D++ Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGDFEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAFNMFDVTARVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDVK 126
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: SPI1_SCHPO (GTP-binding nuclear protein spi1 OS=Schizosaccharomyces pombe GN=spi1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651 FK+VL+GD G GK+ + R EF + +T+GVE + + +WDTAGQE+ + YY ++++DVT +T++NV W ++L NI I+L GNK D++ Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVK 126
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 295 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADL 648 L K+V++GD GVGKS L + T+N+F E TI + + + +D++V I DTAGQE Y A+ Y R G L+VY + +FE V + ++ LR S I+++GNKADL Sbjct: 4 LLKLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSYR-KQVNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADL 121
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC9_GOSHI (Rac-like GTP-binding protein RAC9 OS=Gossypium hirsutum GN=RAC9 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 47/118 (39.83%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651 K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE Y + YRGA LL + + ++ENV ++W+ ELR H N+ I+LVG K DLR Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC9_ARATH (Rac-like GTP-binding protein ARAC9 OS=Arabidopsis thaliana GN=ARAC9 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651 K V +GD VGK+ LL +T N F + T+ F ++ VD K V +WDTAGQE Y + YRGA +L + + +FEN+ ++W+ ELR H + I+LVG K+DLR Sbjct: 20 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-NANVLVDGKTVNLGLWDTAGQEDYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELR-HYAPTVPIVLVGTKSDLR 135
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RABV_DICDI (Ras-related protein RabV OS=Dictyostelium discoideum GN=rabV PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 295 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL-RDHTDSNIVIMLVGNKADLRHLRAVSL 672 + K++++G+ VGKS+LL R TK+EF+ + TIG++F + + + + K QIWD + LL++D+T +F+++ WL +L + + D++I I LVG K+DL R VSL Sbjct: 8 IIKIMILGEKEVGKSSLLIRATKDEFNSQYIPTIGIDFDYKIMEIKGEKYKLQIWDYVSHDHINVFNKQVLSNTKIILLLFDLTNKSSFDSINNWLLKLDQSNKDNSIQIFLVGTKSDLISNRQVSL 134
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAS3_RHIRA (Ras-like protein 3 OS=Rhizomucor racemosus GN=RAS3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 1 Query: 298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-SNIVIMLVGNKADLRHLRAVS 669 +K+V++G GVGKS L +F ++ F E TI + + + +DD+ + DTAGQE Y A+ Y R G +LVY +T ++FE V + +++R D + ++LVGNK DL R VS Sbjct: 10 YKIVIVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCV-IDDETALLDVLDTAGQEEYSAMREQYMRNGEGFVLVYSITSRLSFEEVNTFYQQIRRVKDRDSFPMVLVGNKCDLEGDRQVS 133 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |