CX295519

Overview
NameCX295519
Unique NameCX295519
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: DJC27_DANRE (DnaJ homolog subfamily C member 27 OS=Danio rerio GN=dnajc27 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15
Identity = 39/127 (30.71%), Postives = 73/127 (57.48%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-----NIVIMLVGNKADLRHLRAV 666
            KV+ +G++ VGKS ++ R+ +  F  +  +TIG+++    ++V D+ +K  I+D AG   +  + + +Y+ + G +LVYDV    +F+ ++ WL E++    S     NI+ ++  NK DL   R V
Sbjct:   18 KVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDSQGVILVYDVGLRESFDALDSWLTEMKQEMGSQANMENIIFVVCANKVDLTKRRVV 144          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAS2_HYDMA (Ras-like protein RAS2 OS=Hydra magnipapillata GN=RAS2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15
Identity = 49/130 (37.69%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVS 669
            D D  +K+V++G  GVGKS L  +F ++ F  +   TI   +  + + +DDKV    I DTAGQE + A+   Y R   G LLV+ VT   +F+ + R+  + LR        ++LVGNK+DL + R VS
Sbjct:    4 DLDRQYKLVVVGGGGVGKSALTIQFIQSHFVQDYDPTIEDSYRKQCV-IDDKVAHLDILDTAGQEEFSAMRDEYMRTGEGFLLVFSVTDRSSFDEIPRFHTQILRVKDIEEFPMILVGNKSDLENERTVS 132          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAS1_YEAST (Ras-like protein 1 OS=Saccharomyces cerevisiae GN=RAS1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15
Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN-IVIMLVGNKADLRHLRAVS 669
            +K+V++G  GVGKS L  +F ++ F  E   TI   +  + + +DDKV    I DTAGQE Y A+   Y R   G LLVY VT   +F+ +  + ++++   DS+ I +++VGNK DL + R VS
Sbjct:   11 YKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYR-KQVVIDDKVSILDILDTAGQEEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVS 134          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC7_ORYSJ (Rac-like GTP-binding protein 7 OS=Oryza sativa subsp. japonica GN=RAC7 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15
Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651
            K V +GD  VGK+ +L  +T N F  +   T+   F+   + VD   V   +WDTAGQE Y  +    YRGA   LL + +    ++EN+ ++W+ ELR H   N+ I+LVG K DLR
Sbjct:    8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: DJ27A_XENLA (DnaJ homolog subfamily C member 27-A OS=Xenopus laevis GN=dnajc27-A PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15
Identity = 41/137 (29.93%), Postives = 73/137 (53.28%), Query Frame = 1
Query:  271 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAV 666
            R D       KV+ +G++ VGKS ++ R+ +  F  + ++TIG+++    + + D+ +K  I+D AG   +  + + +Y+   G +LVYDV    TFE+++ WL E++          NIV  +  NK D    R+V
Sbjct:    8 RKDSRKALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVHIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAEMKQELGPQGNIDNIVFAVCANKIDSTKHRSV 144          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC13_GOSHI (Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum GN=RAC13 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651
            K V +GD  VGK+ +L  +T N F  +   T+   F+   + VD   V   +WDTAGQE Y  +    YRGA   LL + +    ++EN+ ++W+ ELR H   N+ ++LVG K DLR
Sbjct:    8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIYKKWIPELR-HYAHNVPVVLVGTKLDLR 123          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RASB_DICDI (Ras-like protein rasB OS=Dictyostelium discoideum GN=rasB PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVS 669
            +K+V++G  GVGKS L  +F +N F  E   TI   +  R  +VD+      I DTAGQ+ Y A+   Y R   G L VYDVT   +FE +    ++ +R   +  + I+LVGNK DL +LR V+
Sbjct:    7 YKLVVMGGGGVGKSALTIQFIQNHFIEEYDPTIEDSYR-RQCQVDEDTCLLDILDTAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINVVREQIIRVKDNDKVPIVLVGNKCDLENLREVT 130          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_ONCVO (GTP-binding nuclear protein Ran OS=Onchocerca volvulus GN=ran-1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 651
            FK+VL+GD G GK+  + R    +   +  +T+GVE        +   ++  +WDTAGQE++  +   YY     A++++DVT  VT++NV  W ++L      NI I+L GN  D++
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGDPEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLA-RVCENIPIVLCGNFVDVK 126          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAN_GIALA (GTP-binding nuclear protein Ran OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRV------DDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL-------RDHT---DSNIVIMLVGNKADLR 651
            FKV+L+GD   GK+  ++R    EF  +  STIGVE       V      + + V   + DTAGQE++  +   YY  +   LL +DVT  VT++NVE W +++       RD +   +  + I+LVGNK D++
Sbjct:    7 FKVILVGDGATGKTTFVTRHITGEFRKQYISTIGVEIRQLPFYVAGQSCPNGREVLLNVHDTAGQEKFGGLRDGYYVDSDACLLFFDVTNRVTYKNVESWYRDVFRICPTRRDASTGEEKPLAIVLVGNKCDVK 140          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: LET60_CAEEL (Ras protein let-60 OS=Caenorhabditis elegans GN=let-60 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1
Query:  298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-NIVIMLVGNKADLRHLRAVSLRMLSRS 690
            +K+V++GD GVGKS L  +  +N F  E   TI   +  + + +D +     I DTAGQE Y A+   Y R   G LLV+ V    +FENV  + +++R   DS ++ ++LVGNK DL   R+V  R +S +
Sbjct:    4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSS-RSVDFRTVSET 133          
The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DJC27_DANRE4.220e-1530.71DnaJ homolog subfamily C member 27 OS=Danio rerio ... [more]
RAS2_HYDMA5.511e-1537.69Ras-like protein RAS2 OS=Hydra magnipapillata GN=R... [more]
RAS1_YEAST5.511e-1539.20Ras-like protein 1 OS=Saccharomyces cerevisiae GN=... [more]
RAC7_ORYSJ5.511e-1538.98Rac-like GTP-binding protein 7 OS=Oryza sativa sub... [more]
DJ27A_XENLA5.511e-1529.93DnaJ homolog subfamily C member 27-A OS=Xenopus la... [more]
RAC13_GOSHI7.198e-1538.14Rac-like GTP-binding protein RAC13 OS=Gossypium hi... [more]
RASB_DICDI9.400e-1539.20Ras-like protein rasB OS=Dictyostelium discoideum ... [more]
RAN_ONCVO9.400e-1533.90GTP-binding nuclear protein Ran OS=Onchocerca volv... [more]
RAN_GIALA9.400e-1535.07GTP-binding nuclear protein Ran OS=Giardia lamblia... [more]
LET60_CAEEL9.400e-1537.88Ras protein let-60 OS=Caenorhabditis elegans GN=le... [more]

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Properties
Property NameValue
Genbank descriptionC05073A10SK DroRLeaf1 Citrus clementina cDNA clone C05073A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bp
AGGTGAAAGCCTTGCTCCCGTCCCTCTCTTCCACCACCCTTCCTAAAAGG
CAATGTTAATAACATCACTCAAACAAGAAGAAGAAGAATAGCGAAAGCGT
TAGATTTTCTTGATCTGTTCCCATCATCAACTTCACCTCACCTGTCTTGC
ACACACACTCACACTTATCTCTCTCTCTCTCTCTATTGCGTTAATTGCAT
AATACACAATTCAATAAGAGAGGAGGGGAAAAAAAGAAGAAGAGAGAAAT
TGAAAAAAATGGGAGCATACAGAGCTGACGACGACTACGATTACTTGTTC
AAGGTGGTGTTAATTGGAGATTCAGGAGTTGGGAAATCAAATCTGTTATC
TCGATTCACTAAGAACGAATTCAGCCTCGAATCGAAATCCACCATCGGCG
TCGAATTCGCCACTCGCAGCATTCGCGTCGACGACAAGGTCGTCAAGGCT
CAGATTTGGGACACCGCCGGCCAAGAACGATATCGTGCTATCACAAGTGC
GTACTACCGGGGAGCTGTTGGTGCCTTGCTTGTCTATGATGTCACCCGAC
ATGTTACTTTTGAGAATGTTGAGAGATGGTTGAAAGAGCTTCGGGATCAC
ACAGACTCAAACATTGTGATAATGCTTGTGGGTAACAAGGCTGATTTGCG
TCACTTGCGTGCTGTTTCACTGAGGATGCTCAGTCGTTCG
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