CX295519

Overview
NameCX295519
Unique NameCX295519
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RASD_DICDI (Ras-like protein rasD OS=Dictyostelium discoideum GN=rasD PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 1
Query:  298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSL 672
            +K+V++G  GVGKS L  +  +N F  E   TI   +  + + +DD+     I DTAGQE Y A+   Y R   G L VY +T   +++ +  + ++ LR      + ++LVGNKADL H R VS+
Sbjct:    4 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYR-KQVSIDDETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSYDEIASFREQILRVKDKDRVPLILVGNKADLDHERQVSV 128          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAS2_DROME (Ras-like protein 2 OS=Drosophila melanogaster GN=Ras64B PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  298 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSL 672
            +K+V++G  GVGKS +  +F ++ F  +   TI   + T+   +DD   K  I DTAGQE + A+   Y R   G LLV+ +  H +F+ + ++ ++ LR        +++VGNK DL+H + VSL
Sbjct:    6 YKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIEDSY-TKQCNIDDVPAKLDILDTAGQEEFSAMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSL 130          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC3_ARATH (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 47/118 (39.83%), Postives = 65/118 (55.08%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651
            K V +GD  VGK+ LL  +T N F  +   T+   F+   I VD   +   +WDTAGQE Y  +    YRGA   LL + +    ++ENV ++W+ ELR H    + I+LVG K DLR
Sbjct:    8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVI-VDGNTINLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELR-HYAPGVPIILVGTKLDLR 123          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: DJ27B_XENLA (DnaJ homolog subfamily C member 27-B OS=Xenopus laevis GN=dnajc27-B PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 42/141 (29.79%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  271 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR---------DHTDSNIVIMLVGNKADLRHLRAV 666
            R D       KV+ +G++ VGKS ++ R+ +  F  + ++TIG+++    +++ D+ +K  I+D AG   +  + + +Y+   G +LVYDV +  +FE+++ WL E++         D+ D NIV  +  NK D    R V
Sbjct:    8 RKDSRKPLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVQIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFESLDAWLAEMKQELGPQINIDNLD-NIVFAVCANKIDSTKHRCV 147          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC2_ORYSJ (Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica GN=RAC2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLRHLRA 663
            K V +GD  VGK+ +L  +T N+F  +   T+   F+  ++ VD  +V   +WDTAGQE Y  +    YRGA   +L + +    ++ENV ++W+ ELR     N+ I+LVG K DLR  R+
Sbjct:    9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLRDHRS 128          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLRHLR 660
            K V +GD  VGK+ +L  +T N F  +   T+   F+   + VD   V   +WDTAGQE Y  +    YRGA   LL + +    ++EN+ ++W+ ELR H    + I+LVG K DLR  R
Sbjct:    8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELR-HYAPTVPIVLVGTKLDLREDR 126          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RHOL_DROME (Ras-like GTP-binding protein RhoL OS=Drosophila melanogaster GN=RhoL PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE-RWLKELRDHTDSNIVIMLVGNKADLR 651
            K+ ++GD  VGK+ +L  +T+NEF  E   T+    A  +I VDD+     +WDTAGQE Y  +    Y      LL Y ++   +FENV+ +W  E+R H  +++ ++LVG K DLR
Sbjct:   13 KITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHAC-NIAVDDRDYNLTLWDTAGQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIR-HFSAHVPVVLVGTKLDLR 128          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651
            K V +GD  VGK+ +L  +T N F  +   T+   F+   + VD   V   +WDTAGQE Y  +    YRGA   LL + +    ++ENV ++W+ ELR H    + I+LVG K DLR
Sbjct:    8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELR-HYAPGVPIILVGTKLDLR 123          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC7_ARATH (Rac-like GTP-binding protein ARAC7 OS=Arabidopsis thaliana GN=ARAC7 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651
            K V +GD  VGK+ +L  +T N+F  +   T+   F+  ++ VD ++V   +WDTAGQE Y  +    YRGA   +L + +    ++ENV ++W+ ELR     N+ I+LVG K DLR
Sbjct:    8 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGQIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 123          
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC2_ARATH (Rac-like GTP-binding protein ARAC2 OS=Arabidopsis thaliana GN=ARAC2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 1
Query:  301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651
            K V +GD  VGK+ +L  +T N F  +   T+   F+   + VD   V   +WDTAGQE Y  +    YRGA   LL + +    ++EN+ ++WL EL+ H    I I+LVG K DLR
Sbjct:    8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELK-HYAPGIPIVLVGTKLDLR 123          
The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASD_DICDI1.228e-1436.51Ras-like protein rasD OS=Dictyostelium discoideum ... [more]
RAS2_DROME1.228e-1434.92Ras-like protein 2 OS=Drosophila melanogaster GN=R... [more]
RAC3_ARATH1.228e-1439.83Rac-like GTP-binding protein ARAC3 OS=Arabidopsis ... [more]
DJ27B_XENLA1.228e-1429.79DnaJ homolog subfamily C member 27-B OS=Xenopus la... [more]
RAC2_ORYSJ1.603e-1437.70Rac-like GTP-binding protein 2 OS=Oryza sativa sub... [more]
RAC2_LOTJA1.603e-1438.02Rac-like GTP-binding protein RAC2 OS=Lotus japonic... [more]
RHOL_DROME2.094e-1438.14Ras-like GTP-binding protein RhoL OS=Drosophila me... [more]
RAC5_ORYSJ2.094e-1438.98Rac-like GTP-binding protein 5 OS=Oryza sativa sub... [more]
RAC7_ARATH2.735e-1438.14Rac-like GTP-binding protein ARAC7 OS=Arabidopsis ... [more]
RAC2_ARATH2.735e-1438.98Rac-like GTP-binding protein ARAC2 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05073A10SK DroRLeaf1 Citrus clementina cDNA clone C05073A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bp
AGGTGAAAGCCTTGCTCCCGTCCCTCTCTTCCACCACCCTTCCTAAAAGG
CAATGTTAATAACATCACTCAAACAAGAAGAAGAAGAATAGCGAAAGCGT
TAGATTTTCTTGATCTGTTCCCATCATCAACTTCACCTCACCTGTCTTGC
ACACACACTCACACTTATCTCTCTCTCTCTCTCTATTGCGTTAATTGCAT
AATACACAATTCAATAAGAGAGGAGGGGAAAAAAAGAAGAAGAGAGAAAT
TGAAAAAAATGGGAGCATACAGAGCTGACGACGACTACGATTACTTGTTC
AAGGTGGTGTTAATTGGAGATTCAGGAGTTGGGAAATCAAATCTGTTATC
TCGATTCACTAAGAACGAATTCAGCCTCGAATCGAAATCCACCATCGGCG
TCGAATTCGCCACTCGCAGCATTCGCGTCGACGACAAGGTCGTCAAGGCT
CAGATTTGGGACACCGCCGGCCAAGAACGATATCGTGCTATCACAAGTGC
GTACTACCGGGGAGCTGTTGGTGCCTTGCTTGTCTATGATGTCACCCGAC
ATGTTACTTTTGAGAATGTTGAGAGATGGTTGAAAGAGCTTCGGGATCAC
ACAGACTCAAACATTGTGATAATGCTTGTGGGTAACAAGGCTGATTTGCG
TCACTTGCGTGCTGTTTCACTGAGGATGCTCAGTCGTTCG
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