CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC6_ORYSJ (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica GN=RAC6 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651 K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE Y + YRGA LL + + ++ENV ++W+ EL+ H + I+LVG K DLR Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC4_ARATH (Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651 K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE Y + YRGA +L + + ++EN+ ++W+ ELR H + I+LVG K DLR Sbjct: 7 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELR-HYAPGVPIILVGTKLDLR 122
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: DJC27_CHICK (DnaJ homolog subfamily C member 27 OS=Gallus gallus GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 38/127 (29.92%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAV 666 KV+ +G++ VGKS ++ R+ + F + +TIG+++ ++V D+ +K I+D AG + + + +Y+ G +LVYDV + +F+ ++ WL E++ NIV ++ NK D R+V Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFDALDAWLAEMKQELGPHGNMDNIVFVVCANKIDCTKHRSV 144
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651 KVVL+GD G GK++L+ F K F ES S E ++++ K V QIWDTAGQ+ Y + +Y A LL +DVT +F+NV RW E+ H + I++VG K DLR Sbjct: 19 KVVLVGDGGCGKTSLMMVFAKGAFP-ESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEV-THFCKGVPIIVVGCKIDLR 134
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC4_ORYSJ (Rac-like GTP-binding protein 4 OS=Oryza sativa subsp. japonica GN=RAC4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDSNIVIMLVGNKADLR 651 K V +GD VGK+ +L +T N+F + T+ F+ + VD V +WDTAGQE Y + YRGA +L + + ++ENV ++WL EL+ H + I+LVG K DLR Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVV-VDGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPELQ-HYAPGVPIVLVGTKLDLR 125
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAC1_ORYSJ (Rac-like GTP-binding protein 1 OS=Oryza sativa subsp. japonica GN=RAC1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE-RWLKELRDHTDSNIVIMLVGNKADLRHLRA 663 K V +GD VGK+ +L +T N+F + T+ F+ ++ VD VV +WDTAGQE Y + YRGA +L + + ++ENV+ +W+ ELR + ++LVG K DLR RA Sbjct: 12 KCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLREDRA 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RABP_DICDI (Ras-related protein RabP OS=Dictyostelium discoideum GN=rabP PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 42/124 (33.87%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL--RDHTDSNIVIMLVGNKADLRHLRAV 666 K++ +G+ GVGKS++L RF ++ L+ +T F T+ +D+ V Q WDT+GQER+ +++S++YR G +L + V +F+ ++ W EL + + +LVGNK DL + V Sbjct: 10 KIITVGNYGVGKSSILKRF--HQVDLDDNTT---GFKTKKFIIDNHHVSVQTWDTSGQERFCSLSSSFYRNCDGVILCFSVDNEDSFKALDLWRDELIKFGYFPDRVPFILVGNKFDLEFKKHV 128
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 31/116 (26.72%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 301 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 648 K++ +GDS VGK+++ + F ++ + ++ T+ F ++++ ++++ V +WDT QER+ ++ YYR + L +D+ +F+N+++W+ E R + +L+G K D+ Sbjct: 7 KIITLGDSYVGKTSVFNNFVTGKYEI-NECTVSPSFYSKTLTIENEPVILNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDKWMDEARKFCIGKVPFVLIGTKKDI 121
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: YPT11_YEAST (GTP-binding protein YPT11 OS=Saccharomyces cerevisiae GN=YPT11 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 316 GDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFEN-VERWLKELRDHTDSNIVI----MLVGNKADLRHLRAVS 669 G+ +G N NE +E++STIG++ T + +D++ +WDTAGQERY+ AI + Y+ +L YD+T +F++ +ERW+ + ++ S ++ LVGNK DL R V+ Sbjct: 180 GNPNIGDDNNHEMADPNEIVIETRSTIGIDIKTNLVNIDNRFFNVILWDTAGQERYQNAIIPSLYKKTNAVILTYDITNAKSFQSCMERWIVQALENFSSQDLLKARFFLVGNKIDLYKERQVT 303
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: YPT11_YEAS7 (GTP-binding protein YPT11 OS=Saccharomyces cerevisiae (strain YJM789) GN=YPT11 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 316 GDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFEN-VERWLKELRDHTDSNIVI----MLVGNKADLRHLRAVS 669 G+ +G N NE +E++STIG++ T + +D++ +WDTAGQERY+ AI + Y+ +L YD+T +F++ +ERW+ + ++ S ++ LVGNK DL R V+ Sbjct: 180 GNPNIGDDNNHEMADPNEIVIETRSTIGIDIKTNLVNIDNRFFNVILWDTAGQERYQNAIIPSLYKKTNAVILTYDITNAKSFQSCMERWIVQALENFSSQDLLKARFFLVGNKIDLYKERQVT 303 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |