CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36 Identity = 68/128 (53.12%), Postives = 98/128 (76.56%), Query Frame = 1 Query: 286 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36 Identity = 68/128 (53.12%), Postives = 98/128 (76.56%), Query Frame = 1 Query: 286 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36 Identity = 68/128 (53.12%), Postives = 98/128 (76.56%), Query Frame = 1 Query: 286 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36 Identity = 68/128 (53.12%), Postives = 98/128 (76.56%), Query Frame = 1 Query: 286 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36 Identity = 68/128 (53.12%), Postives = 98/128 (76.56%), Query Frame = 1 Query: 286 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.490e-36 Identity = 73/127 (57.48%), Postives = 93/127 (73.23%), Query Frame = 1 Query: 286 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 Y YLFK ++IGD+GVGKS LL +FT F T+GVEF R I +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H++SN+VIML+GNK+DL R V Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREV 129
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.336e-36 Identity = 71/126 (56.35%), Postives = 92/126 (73.02%), Query Frame = 1 Query: 271 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 648 RA DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H N+ +LVGNKAD+ Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.336e-36 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 286 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 Y +LFK ++IGD+GVGKS LL +FT F TIGVEF R I +D+K +K QIWDTAGQE +R+IT +YYRG+ GALLVYD+TR TF ++ WLK+ R + +SN+ I+L+GNK+D+ RAVS Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVS 129
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.336e-36 Identity = 70/122 (57.38%), Postives = 96/122 (78.69%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 648 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K++K QIWDTAGQER+R ITS+YYRGA G ++VYDVT HV+F NV++W++E++ + ++ +LVGNK DL Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDL 125
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 4.336e-36 Identity = 71/129 (55.04%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 +Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I V + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVT 135 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |