CX295519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 4.794e-35 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL RA+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAI 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.262e-35 Identity = 71/128 (55.47%), Postives = 95/128 (74.22%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +D KV+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL + V Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVV 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.262e-35 Identity = 68/132 (51.52%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 277 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSL 672 D+ YD+LFK+VL+GD+ VGK+ ++ RF FS STIGV+F +++ + K VK QIWDTAGQER+R IT +YYR A GA+L YD+T+ +F +V W++++R + SNIV +L+GNK+DL LR VSL Sbjct: 12 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSL 143
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 669 +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK DL R VS Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVS 132
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +LVGNK DL + V Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVV 131
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +LVGNK DL + V Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVV 134
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +LVGNK DL + V Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVV 134
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +LVGNK DL + V Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVV 134
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +LVGNK DL + V Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVV 134
BLAST of CX295519 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 283 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 666 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +LVGNK DL + V Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVV 134 The following BLAST results are available for this feature:
BLAST of CX295519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295519 ID=CX295519; Name=CX295519; organism=Citrus clementina; type=EST; length=690bpback to top |