CX295521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 69/161 (42.86%), Postives = 107/161 (66.46%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASCC 687 FK++TV + K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +++V+ E + A+++G F E SAK++++V QAF + I ++M+ + P++ A T P+ Q+ C Sbjct: 59 FKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 70/161 (43.48%), Postives = 107/161 (66.46%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASCC 687 FK++TV + K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +++VV E + A+++G F E SAK++++V QAF + I ++M+ + P+M + T P+ Q+ C Sbjct: 59 FKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33 Identity = 70/171 (40.94%), Postives = 111/171 (64.91%), Query Frame = -1 Query: 211 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-----KNRMASQPAMNNARPPTVQIK-------GQPVNQKASCCST 687 F+ RT+ K+VK QIWDTAGQER+R +TS+YYRGA G ++VYD+T +++F+++ +WL E+ +A N+ +L+GNK DL D++ V E AK FA + G+ F+ETSA ++ N+E AF+ + +I K +A+ +N P ++ K GQ + +K +CCS+ Sbjct: 52 FQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 64/128 (50.00%), Postives = 90/128 (70.31%), Query Frame = -1 Query: 304 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNR 687 FKIRT+E GK +KLQ+WDTAGQERFRTIT++YYRGA GI+++YDVTD SF NV+ W + ++A+E+ LVGNKCD + VS E + A ++ +PF+E SAK + NV+ F + + I+ + Sbjct: 51 FKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 71/168 (42.26%), Postives = 106/168 (63.10%), Query Frame = -1 Query: 211 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-----KNRMASQPAMNNARPP----TVQIKGQPVNQKASCCST 687 F RT++ +GKTVK QIWDTAGQER+R ITS+YYRGA G ++ YD+T +++F+NV++WL E+ + N+ +L GNK DL + VS + +A + G+ F+ETSA +++NV++AF + DI K +A+Q A + P T+ + N K CCST Sbjct: 49 FATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTINVSDNSANVKRGCCST 216
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 64/130 (49.23%), Postives = 96/130 (73.85%), Query Frame = -1 Query: 298 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA 687 FK++TV + K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +++VV E + A+++G F E SAK++++V QAF + I ++M+ Sbjct: 59 FKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 188
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 71/158 (44.94%), Postives = 104/158 (65.82%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR-PPTVQIKGQPVNQKASCC 687 F+ + ++ DG VKLQ+WDTAGQERFR++T +YYR AH ++++YDVT++ SF+N++ WL EI YA +V +L+GNK D ++VV E + A E G+PFMETSAK +NV+ AF A+ ++K R P+ R V+ +G + ASCC Sbjct: 101 FRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMKAPSEPRFRLHDYVKREG----RGASCC 254
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 68/151 (45.03%), Postives = 102/151 (67.55%), Query Frame = -1 Query: 238 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIG-IPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPV 687 F +R +E DGK VK+Q+WDTAGQERFRTIT SYYR AH II YD+T + +F +V W++EI++Y + N+ +L+GNKCDL +K+ V +E A A++ G + +ETSAK+S N+++ F+ M ++ R S P P ++ ++ PV Sbjct: 54 FTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELMAR-HSLPLYGEGAPGSLPLESTPV 203
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB12_MOUSE (Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 69/150 (46.00%), Postives = 101/150 (67.33%), Query Frame = -1 Query: 241 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEI-GIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQP 687 FKI+TVE GK ++LQIWDTAGQERF +ITS+YYR A GII+VYD+T +E+F+++ +W+ ID+YASE+ LLVGNK D + +S + + FA +I G+ F E SAKD+ NV++ F+ + DI +M N + ++ +P Sbjct: 78 FKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRNELSNSILSLQPEP 227
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33 Identity = 75/168 (44.64%), Postives = 103/168 (61.31%), Query Frame = -1 Query: 211 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVN---------QKASCCST 687 F R++ D K VK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ + +N+ +LVGNK DL + VS E AKAFA+ FMETSA +S+NVE AF + +I ++ + A+ P KGQ +N +K CCS+ Sbjct: 51 FATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEI-YKVVCRKALEVGDDPAALPKGQTINVGKDDVSAVKKVGCCSS 217 The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bpback to top |