CX295521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33 Identity = 69/158 (43.67%), Postives = 96/158 (60.76%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 687 F +TV D TVK +IWDTAGQER+ ++ YYRGA I+VYD+T++ESF K W+ E+ R AS N+ L GNK DL +K+ V ++ A+++AD+ + FMETSAK SMNV + FMA+ + P N+AR V + + CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCS 214
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33 Identity = 68/158 (43.04%), Postives = 96/158 (60.76%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 687 F +TV D TVK +IWDTAGQER+ ++ YYRGA I+VYD+T++ESF K W+ E+ R AS N+ L GNK DL +K+ V ++ A+++AD+ + FMETSAK SMNV + FMA+ + P N+ R V + ++ CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSTRGRGVDLTEPTQPTRSQCCS 214
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKG--QPVNQKASCC 687 F+ + V+ DG VKLQIWDTAGQERFR++T +YYR AH ++++YDVT++ SF++++ WL EI +A ++V +L+GNK D ++ V E A+ A + G+PFMETSAK +NV+ AF A+ ++K R P+ P Q+ + + ASCC Sbjct: 101 FRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPS-----EPRFQLHDYIKREGRGASCC 254
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB12_CANFA (Ras-related protein Rab-12 (Fragment) OS=Canis familiaris GN=RAB12 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33 Identity = 69/150 (46.00%), Postives = 101/150 (67.33%), Query Frame = -1 Query: 241 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEI-GIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQP 687 FKI+TVE GK ++LQIWDTAGQERF +ITS+YYR A GII+VYD+T +E+F+++ +W+ ID+YASE+ LLVGNK D + ++ + + FA EI G+ F E SAKD+ NV++ F+ + DI +M N + ++ +P Sbjct: 43 FKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEP 192
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33 Identity = 69/168 (41.07%), Postives = 110/168 (65.48%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-----KNRMASQPAMNNARP-----PTVQIKGQPVNQKASCCS 687 F ++++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T ++SF+NV +WL E+ +A ++ ++VGNK DL + VS + KA A++ G+ F+ETSA +++NVE+AF + ++ + +A++ A + P T+ I N K +CCS Sbjct: 49 FATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQGKTISIDSAAGNTKRACCS 216
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33 Identity = 70/168 (41.67%), Postives = 109/168 (64.88%), Query Frame = -1 Query: 211 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK-GQPV--------NQKASCCST 687 F RT++ +G+TVK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +L+GNK DL + V+ E A+++A++ G+ F+ETSA +++NVE+AF + +++ ++ + ++ IK GQ + N K CCS+ Sbjct: 49 FATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.589e-33 Identity = 68/158 (43.04%), Postives = 96/158 (60.76%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 687 F +TV D TVK +IWDTAGQER+ ++ YYRGA I+VYD+T++ESF K W+ E+ R AS N+ L GNK DL +K+ V ++ A+++AD+ + FMETSAK SMNV + FMA+ + P +N R V + ++ CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGINCTRGRGVDLTEPTQPTRSQCCS 214
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 7.589e-33 Identity = 68/150 (45.33%), Postives = 101/150 (67.33%), Query Frame = -1 Query: 241 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEI-GIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQP 687 FKI+TVE GK ++LQIWDTAGQERF +ITS+YYR A GII+VYD+T +E+F+++ +W+ ID+YASE+ LLVGNK D + ++ + + FA +I G+ F E SAKD+ NV++ F+ + DI +M N + ++ +P Sbjct: 79 FKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEP 228
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 9.912e-33 Identity = 75/172 (43.60%), Postives = 105/172 (61.05%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 687 F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 48 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 9.912e-33 Identity = 75/172 (43.60%), Postives = 105/172 (61.05%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 687 F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 48 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213 The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bpback to top |