CX295521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 74/172 (43.02%), Postives = 104/172 (60.47%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 687 F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA D NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 48 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32 Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = -1 Query: 313 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI 687 F R + D K +K QIWDTAGQER+R ITS+YYRGA G +IVYD+T Q SF+NV +WL E+ +A N+ +LVGNK DL + VS E A+AFA E + F+ETSA D+ NVE+AF + +I Sbjct: 47 FATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32 Identity = 69/171 (40.35%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 211 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-----KNRMASQPAMNNARPPTVQIK-------GQPVNQKASCCST 687 F+ RT+ K+VK QIWDTAGQER+R +TS+YYRGA G ++VYD+T +++F+++ +WL E+ +A N+ +L GNK DL D++ V E AK FA + G+ F+ETSA ++ +E AF+ + +I K +A+ +N+ P ++ K GQ + K +CCS+ Sbjct: 52 FQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32 Identity = 63/129 (48.84%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 F R + D K +KLQIWDTAGQE FR+IT SYYRG+ G ++VYD+T +++FN++ WL + YA+ N+ +L+GNK D+ K+ VSYE + FADE G+ F+ETSAK + NVE+AF+ + I ++ Sbjct: 42 FGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKI 170
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31 Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPV-----------NQKASCCS 687 F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ +A N+ +LVGNK DL + V E A+AF + G+ F+ETSA +S NVE+AF + +I + ++ + + P + +G+ V +K CCS Sbjct: 49 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIG-EGRDVIVIDNAHDDGGKKKGGCCS 216
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB12_RAT (Ras-related protein Rab-12 (Fragment) OS=Rattus norvegicus GN=Rab12 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.431e-31 Identity = 65/130 (50.00%), Postives = 93/130 (71.54%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEI-GIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 FKI+TVE GK ++LQIWDTAGQERF +ITS+YYR A GII+VYD+T +E+F+++ +W+ ID+YASE+ LL GNK D + +S + + FA +I G+ E SAKD+ NV++ F+ + DI +M Sbjct: 32 FKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLAGNKLDCETDREISRQQGEKFAQQITGMRLSEPSAKDNFNVDEIFLKLVDDILKKM 161
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.431e-31 Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVN--------QKASCCS 687 F +T + +GK VK QIWDTAGQER+R ITS+YYRGA G +++YDVT +F N +WL E+ + N+ +L+GNKCDL V E AKAFA+ + FMETSA D+ NVE AF + I ++ + + KG+ +N ++ CCS Sbjct: 50 FATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCS 215
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31 Identity = 67/158 (42.41%), Postives = 94/158 (59.49%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 687 F ++V D TVK +IWDTAGQER+ ++ YYRGA I+VYD+T+QE+F K W+ E+ R AS ++ L GNK DL K++V YE A+A+AD+ + FMETSAK +MNV F+A+ + + R V + Q K+ CCS Sbjct: 57 FLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDLHEQTQQNKSQCCS 214
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31 Identity = 73/161 (45.34%), Postives = 107/161 (66.46%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI----KNRMASQPAMNNARPPTVQIKGQPVNQKASC 687 FK++ V+ DGK V L IWDTAGQE+FR + SSYYRGAHGII+ YDVT +ESF+N+ WLNE++ +A+ N+ KLLVGNK D +++V E A+ FA + + F+E SAK + ++QAF + I +N +SQP N +V+++ +P + + C Sbjct: 43 FKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKENREVTREEGAE-FAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNTSSSQPKQRNT--GSVKVEDEPDHNQGVC 200
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31 Identity = 70/165 (42.42%), Postives = 105/165 (63.64%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQ------IKGQPVNQKA-SCCS 687 F+ +++ DGK VK QIWDTAGQERFR +TS+YYRGA G ++VYD+T +F NV +WL+E++ ++ V K+L+GNKCDL + VS E K+ A+ G+ FMETSA DS NV+ AF + +I + ++ + +++ + +K + K SCCS Sbjct: 49 FQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTVNRVSLVKNENEGTKTFSCCS 213 The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bpback to top |