CX295521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.699e-30 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVN--------QKASCCS 687 F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV+ WL E+ + N+ +LVGNK DL V E AK+FA++ + FMETSA ++ NVE AF + I + ++ + + V KG ++ +K CCS Sbjct: 50 FATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIGKDVSAVKKGGCCS 215
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 64/158 (40.51%), Postives = 92/158 (58.23%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 687 F +TV D TVK +IWDTAGQER+ ++ YYRGA I+VYD+T+ ++F K W+ E+ R AS N+ L GNK DL K+ V ++ A+A+AD+ + FMETSAK +MNV + FMA+ + R V ++ ++ CCS Sbjct: 58 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCS 215
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 64/158 (40.51%), Postives = 92/158 (58.23%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 687 F +TV D TVK +IWDTAGQER+ ++ YYRGA I+VYD+T+ ++F K W+ E+ R AS N+ L GNK DL K+ V ++ A+A+AD+ + FMETSAK +MNV + FMA+ + R V ++ ++ CCS Sbjct: 58 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCS 215
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 64/158 (40.51%), Postives = 93/158 (58.86%), Query Frame = -1 Query: 214 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 687 F +TV D TVK +IWDTAGQER+ ++ YYRGA I+VYD+T+ ++F K W+ E+ R AS N+ L GNK DL K+ V ++ A+A+A++ + FMETSAK +MNV + FMA+ + A R V ++ ++ CCS Sbjct: 58 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQENNPASRSQCCS 215
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 71/170 (41.76%), Postives = 102/170 (60.00%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIK----------NRMASQPAMNNARPPTVQ---IKGQPVNQKASCC 687 F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL ++ V E +AFA E G+ FMETSAK + NVE+AF+ +I N A+ + P Q + G NQ +CC Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINNEANGIKIGPQHSPASQSLNVGGSGGNQGGNCC 212
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 62/129 (48.06%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL ++ V E +AFA E G+ FMETSAK + NVE+AF+ +I ++ Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 62/129 (48.06%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL ++ V E +AFA E G+ FMETSAK + NVE+AF+ +I ++ Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 62/129 (48.06%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL ++ V E +AFA E G+ FMETSAK + NVE+AF+ +I ++ Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 62/129 (48.06%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL ++ V E +AFA E G+ FMETSAK + NVE+AF+ +I ++ Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 62/129 (48.06%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL ++ V E +AFA E G+ FMETSAK + NVE+AF+ +I ++ Sbjct: 43 FGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171 The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bpback to top |