CX295521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57 Identity = 113/157 (71.97%), Postives = 124/157 (78.98%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 687 FKIRT+E DGKT+KLQIWDTAGQER RTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P ++I PV Q C Sbjct: 45 FKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.519e-57 Identity = 112/157 (71.34%), Postives = 124/157 (78.98%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 687 FKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P ++I PV C Sbjct: 45 FKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.383e-57 Identity = 110/157 (70.06%), Postives = 125/157 (79.62%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 687 FKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL+EIDRYA ENVNKLLVGNK DLT K+VVS + AK FA+ +GI F+ETSAK++ NVE+AFM M A IK RMA+ P A + P N + CC Sbjct: 45 FKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPKAGVKLTPGQQVPSNGGSKCC 201
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.286e-56 Identity = 108/158 (68.35%), Postives = 125/158 (79.11%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM-ASQPAMNNARPPTVQIKGQPVNQKASCC 687 FKIRT+E +GKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ +F NV+QWL EIDR+A ENVNKLLVGNK DL KKVV + TAKAFAD + IPF+ETSAK S NVEQAFM M +IKNR+ ASQP + V P++ K+ CC Sbjct: 45 FKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPKSGCC 202
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.679e-56 Identity = 111/158 (70.25%), Postives = 125/158 (79.11%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQP-AMNNARPPTVQIKGQPVNQKASCC 687 FKIRT E +GKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQ+SFNNVKQWL EIDRYA E VN+LLVGNK D+ DKKVV Y AK FAD + IPF+ETSAKDS NVEQAF+ M+ IK RM + A +NA+ +G V+Q +S C Sbjct: 45 FKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGTNVSQSSSNC 202
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 7.054e-55 Identity = 107/157 (68.15%), Postives = 122/157 (77.71%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 687 FKI+T+E DGKT+KLQIWDTAGQERF TITSSYYRGAHG ++VYDVTDQES+ NVKQWL EIDR+ASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK +M A R P ++I PV C Sbjct: 45 FKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52 Identity = 106/162 (65.43%), Postives = 118/162 (72.84%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPP----TVQIKGQPV-NQKASCC 687 FKI+TVE DGKTVKLQIWDTAGQERFRTITSSYYRG+HGIIIVYDVTDQESFN VK WL EIDRYA+ V KLLVGNKCDL DK+VV Y+ AK FAD +PF+ETSA DS NVE AF+ M IK M+ Q + V +KGQ + N CC Sbjct: 45 FKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGNVNLKGQSLTNTGGGCC 206
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 6.180e-51 Identity = 98/159 (61.64%), Postives = 117/159 (73.58%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKG---QPVNQKASC 687 FKIRT+ DGK +KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD SFNNVKQW+ EI RYA ++V +LLVGNKCDL +KK+V TA+ +AD +GIPF+ETSAK S NVEQAFM M ++IK NN+ +K P+ +K C Sbjct: 45 FKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNNNSTYNAHVVKPTGFTPIGKKKKC 203
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.071e-51 Identity = 98/148 (66.22%), Postives = 117/148 (79.05%), Query Frame = -1 Query: 244 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQ 687 FKI+T+ DGKT+KLQIWDTAGQERFRTITSSYYRGA GII+VYD TDQ+SF NVKQW+ EIDRYA ENVNKLLVGNK DL ++KVV AK+FA+ GIPF+ETSAK++ NVE+ F++M DIKNR+A +P V IK + Sbjct: 47 FKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD--IQETPKPDEVDIKSK 192
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.896e-48 Identity = 90/160 (56.25%), Postives = 123/160 (76.88%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQ---IKGQPVNQKASCC 687 FKIRT+E +GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+ I+++A+++VNK+L+GNKCD+ +KKVV K+ ADE GI F+ETSAK+S+NVE+AF+++ DIK RM P N +P VQ G N+K +CC Sbjct: 52 FKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP---NEQPQVVQPGTNLGANNNKKKACC 208 The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bpback to top |