CX295521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.243e-42 Identity = 84/172 (48.84%), Postives = 115/172 (66.86%), Query Frame = -1 Query: 172 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCST*SFVLSFIACICL 687 FKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF N++ W+ I+ +AS +V K+++GNKCD DK+ VS E + A GI FMETSAK ++N+E AF + DIK +M + N+ + +K P QK S SF C+ L Sbjct: 45 FKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQKKS---------SFFRCVLL 207
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.439e-41 Identity = 84/172 (48.84%), Postives = 117/172 (68.02%), Query Frame = -1 Query: 172 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCST*SFVLSFIACICL 687 FKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNK D+ DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ + +K P QK S SF C+ L Sbjct: 45 FKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQKRS---------SFFRCVLL 207
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 5.797e-41 Identity = 80/139 (57.55%), Postives = 108/139 (77.70%), Query Frame = -1 Query: 277 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADI-KNRM-ASQPAMNN 687 +K + + DG+T LQIWDTAGQERFRTITSS+YRGAHG+++ YDVTDQ ++NNV+ W+ EI RYA V+++LVGNKCDL D+K+V+ A+ +AD +GIPFME SA +NVE+AFMAM +I +N M S+P++ N Sbjct: 43 YKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYRNHMGGSKPSVVN 181
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.572e-41 Identity = 76/149 (51.01%), Postives = 111/149 (74.50%), Query Frame = -1 Query: 241 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQP 687 FKIRTVE DGK +KLQIWDTAGQERFRTIT++YYRGA GI+ VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ +K+ VS E + A + GI F+ETSAK S+NVE+AF+ + DI ++ + N+ + ++K P Sbjct: 45 FKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKLKSPP 193
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.889e-41 Identity = 78/157 (49.68%), Postives = 110/157 (70.06%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 687 FKIRT++ + VKLQ+WDTAGQERFRTIT++YYRGA GI++VYDVTD++SFNN++ W + YA+E V +LVGNKCDL +K+VVS E +A AD+ GIPF+E S+K ++NVE+ F ++ I++ +A N + + I N + CC Sbjct: 48 FKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKG-NESGSGGINIAEGEENSASKCC 203
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 9.889e-41 Identity = 79/153 (51.63%), Postives = 112/153 (73.20%), Query Frame = -1 Query: 229 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQK 687 FKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+ DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ + + +K QK Sbjct: 45 FKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQQK 197
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 9.889e-41 Identity = 79/153 (51.63%), Postives = 112/153 (73.20%), Query Frame = -1 Query: 229 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQK 687 FKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+ DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ + + +K QK Sbjct: 45 FKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQQK 197
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.687e-40 Identity = 73/129 (56.59%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 FKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+E SAK SMNVE+AF + DI ++ Sbjct: 45 FKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKL 173
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.203e-40 Identity = 73/129 (56.59%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 FKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+ETSAK S NVE+AF + DI ++ Sbjct: 45 FKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.203e-40 Identity = 73/129 (56.59%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 FKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+ETSAK S NVE+AF + DI ++ Sbjct: 45 FKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKL 173 The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bpback to top |