CX295521

Overview
NameCX295521
Unique NameCX295521
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RASY_DICDI (Ras-like protein rasY OS=Dictyostelium discoideum GN=rasY PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15
Identity = 45/132 (34.09%), Postives = 73/132 (55.30%), Query Frame = -1
Query:  271 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR 663
            D +   L I DTAGQ+    +   + R   G I+VY VT + SF+ V+ +  +I R    ++V  +++GNK DL D++ V+++  K  A  +G+ FME SAK  +NVE+ F      +K R  S    +N++
Sbjct:   54 DDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTFQEGKDLARCLGMSFMEVSAKTRLNVEEVFNETVRCVKRREESLLKKDNSK 185          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB32_PIG (Ras-related protein Rab-32 OS=Sus scrofa GN=RAB32 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15
Identity = 49/163 (30.06%), Postives = 81/163 (49.69%), Query Frame = -1
Query:  217 FKIRTVEQDGKT-VKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA----SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIP-FMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 687
            F ++ +  D +T V+LQ+WD AGQERF  +T  YY+ A G ++V+D++    F  V +W N++D          +  +L+ NKCD       +      F  E G   + ETSAKD++N+++A   +  +I     S P+  N     +  +      K+ CC
Sbjct:   64 FALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHLPNGSPIPAVLLANKCDQKKDSGQNPSQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQSFPSEENDGRIKLDEETMKKENKSHCC 226          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RASZ_DICDI (Ras-like protein rasZ OS=Dictyostelium discoideum GN=rasZ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = -1
Query:  295 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMAS 663
            D +   L I DTAGQ+    +   + R   G ++VY +T + SF+ V+ +  +I R    ++V  +++GNK DL D++ V+Y+  K  A  +G+ FME SAK   N+E+ F      +K R  S
Sbjct:   53 DDQVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSITSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTYQEGKDLARCLGMSFMEVSAKSRANIEEVFNETVRSVKRREES 176          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RASK_MONDO (GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = -1
Query:  310 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIK 663
            DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   SE+V  +LVGNKCDL   + V  + A+  A   GIPF+ETSAK     + AF  +  +I+
Sbjct:   47 DGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQDLARSYGIPFIETSAKTRQGGDDAFYTLVREIR 164          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = -1
Query:  307 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKN 663
            D +   L I DTAGQE +  +   Y R   G ++VY +T + S + +  +  +I R   ++ V  ++VGNK DL ++K VSY+     A ++  PF+ETSAK ++NVE+AF  +   +++
Sbjct:   54 DDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAFYTLARLVRD 173          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAP1B_XENTR (Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = -1
Query:  304 RTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADE-IGIPFMETSAKDSMNVEQAFMAMTADIKNR 678
            + VE DG+   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL D++VV  E  +  A +     F+E+SAK  +NV + F  +   I  +
Sbjct:   42 KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = -1
Query:  304 RTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADE-IGIPFMETSAKDSMNVEQAFMAMTADIKNR 678
            + VE DG+   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL D++VV  E  +  A +     F+E+SAK  +NV + F  +   I  +
Sbjct:   42 KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAP1B_DANRE (Ras-related protein Rap-1b OS=Danio rerio GN=rap1b PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = -1
Query:  304 RTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADE-IGIPFMETSAKDSMNVEQAFMAMTADIKNR 678
            + VE DG+   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL D++VV  E  +  A +     F+E+SAK  +NV + F  +   I  +
Sbjct:   42 KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = -1
Query:  265 RTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKL-LVGNKCDLTDK-KVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPP 678
            + V  D +   L I DTAGQE +  +   Y R   G +IVY +  + SF  V  +  +I R    +   + ++GNK DL DK + V     K  A   G PF+ETSAK  +NVE+AF  +  +IK R    P      PP
Sbjct:   43 KQVNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADLPDKDRKVPPMEGKELAKSFGAPFLETSAKSRVNVEEAFFTLVREIK-RWNQNPQNEEMLPP 181          
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB7L_RAT (Ras-related protein Rab-7L1 OS=Rattus norvegicus GN=Rab7l1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 48/154 (31.17%), Postives = 84/154 (54.55%), Query Frame = -1
Query:  217 DGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRY----ASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIP-FMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 663
            D + V+LQ+WD AGQERF ++T  YYR A   +I++DVT+  +F+N ++W  ++D      + E V  LL+ NK DL+    VS +    F+ E G   + ETS K++ N+ +A   +   + N        ++ +   + ++ +P +   +CC
Sbjct:   53 DSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDLS-PWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSREDIMSSSTQGNYINLQTKP-SPGWTCC 204          
The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASY_DICDI2.453e-1534.09Ras-like protein rasY OS=Dictyostelium discoideum ... [more]
RAB32_PIG2.453e-1530.06Ras-related protein Rab-32 OS=Sus scrofa GN=RAB32 ... [more]
RASZ_DICDI3.203e-1533.87Ras-like protein rasZ OS=Dictyostelium discoideum ... [more]
RASK_MONDO3.203e-1537.82GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 ... [more]
RAS2_YEAST3.203e-1535.00Ras-like protein 2 OS=Saccharomyces cerevisiae GN=... [more]
RAP1B_XENTR3.203e-1535.43Ras-related protein Rap-1b OS=Xenopus tropicalis G... [more]
RAP1B_XENLA3.203e-1535.43Ras-related protein Rap-1b OS=Xenopus laevis GN=ra... [more]
RAP1B_DANRE3.203e-1535.43Ras-related protein Rap-1b OS=Danio rerio GN=rap1b... [more]
RASC_DICDI4.184e-1535.71Ras-like protein rasC OS=Dictyostelium discoideum ... [more]
RAB7L_RAT4.184e-1531.17Ras-related protein Rab-7L1 OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionC05073A12SK DroRLeaf1 Citrus clementina cDNA clone C05073A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bp
GCCACTATCAAGCAACTCCTCATTTGTACATGCCATATAATAGTAATATA
GACTGAAAGAATTGAAATTTCACAATAACTTACAAAAACTAGTAAAGCAA
TCCGTCATATGATTCATGGGGTAGGAATAGTTTTTCACTGGTTCCTACAA
CGTGATTGAGAAAGCTACCCATAAACAAATGCACGCAATGAAGGATAAGA
CAAACGATTAAGTTGAGCAGCAGCTGGCCTTCTGGTTCACCGGTTGTCCT
TTTATCTGCACAGTTGGTGGCCTTGCATTGTTCATTGCAGGTTGACTTGC
CATCCTGTTCTTAATGTCAGCAGTCATAGCCATAAAAGCTTGTTCCACGT
TCATAGAATCCTTTGCGCTGGTCTCCATGAACGGGATGCCAATTTCATCA
GCAAATGCCTTCGCTGTTTCATAAGAGACAACCTTCTTATCAGTGAGATC
ACACTTGTTTCCAACCAGAAGCTTGTTTACATTTTCACTTGCATAGCGAT
CAATTTCATTCAACCACTGCTTAACGTTGTTGAAGCTCTCTTGGTCTGTA
ACATCATAAACAATGATAATGCCATGTGCTCCACGGTAGTAGCTGCTAGT
GATTGTCCTGAATCGTTCTTGCCCTGCAGTGTCCCAAATTTGGAGTTTTA
CAGTCTTCCCGTCTTGCTCCACTGTGCGAATTTTAAA
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