CX295521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 687 FK++T+ ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 59 FKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 687 FK++T+ ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 59 FKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 687 FK++T+ ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 59 FKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 687 FK++T+ ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 59 FKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA-----SQPAMNNARP-PTVQIKGQPVNQKASC 687 FK++T+ ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ D++VVS E + AD +G F E SAKD++NV+Q F + I +M+ + PA+ A+ P + + P +Q +C Sbjct: 59 FKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 75/157 (47.77%), Postives = 106/157 (67.52%), Query Frame = -1 Query: 214 RTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQK--ASCCS 678 + V DG VKLQIWDTAGQERFR++T +YYR A ++++YD+T+Q SF+N++ WL EI YA +V +L+GNK D++ ++V+ E + A E G+PFMETSAK MNVE AF+A+ ++K R QP P+ QI+ +QK +SCCS Sbjct: 70 KVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQP-----DEPSFQIRDYVESQKKRSSCCS 221
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.521e-36 Identity = 75/160 (46.88%), Postives = 111/160 (69.38%), Query Frame = -1 Query: 217 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQP--AMNNARPPTVQI-KGQPVNQKASCC 687 FKI+TV+ +GK VKLQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW ++ +A++ LLVGNK D+ + +VV+ + +A A E+GIPF+E+SAK+ NV + F + I+ ++ S + N + + I G + K++CC Sbjct: 57 FKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINSGSGNSSKSNCC 215
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36 Identity = 73/129 (56.59%), Postives = 98/129 (75.97%), Query Frame = -1 Query: 301 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 687 FKI+TV +GK +KLQIWDTAG++RFR + +S+YRG HG+IIVYDVTDQ SF NV W+ +I RYA+ENV K+++GNK DL +KVV A+ FAD + IPF E SAK S+N+E+AF+++ NR+ Sbjct: 44 FKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVKLCINRI 171
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 66/130 (50.77%), Postives = 101/130 (77.69%), Query Frame = -1 Query: 298 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA 687 FK++TV + K VKLQIWDTAGQER+RTIT++YYRGA G I++YDVT+++SFN+V+ W+ +I Y+ +N +LVGNKCD+ D++V+S+E + AD++G+ F ETSAK+++NV+ F + I ++M+ Sbjct: 58 FKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMS 187
BLAST of CX295521 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.615e-36 Identity = 75/165 (45.45%), Postives = 110/165 (66.67%), Query Frame = -1 Query: 220 FKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQ---------PVNQKASC 687 FK++TV + K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN+V+ W +I Y+ EN +LVGNKCD+ ++VVS + + AD++G+ F ETSAK+++NV+ F + I ++MA + + P Q KGQ P Q+ +C Sbjct: 59 FKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAE----SLDKDPQQQPKGQKLEANPTQKPAQQQCNC 219 The following BLAST results are available for this feature:
BLAST of CX295521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295521 ID=CX295521; Name=CX295521; organism=Citrus clementina; type=EST; length=687bpback to top |